RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 GzmfP08883 248 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Fbxw26Q8BI58 466 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Prss35Q8C0F9 409 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 FrkQ922K9 512 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 PpifQ99KR7 206 aaKnown RBP11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tmem147Q9CQG6 224 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 H2al3Q9D4U4 128 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ppp1r1aQ9ERT9 171 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Wnk1P83741 2377 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Nckap5E9QAE1 1909 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Igkv5-37A0A140T8N4 115 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm4791J3QQ14 102 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 DhodhO35435 395 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 P01759 136 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rpl27aP14115 148 aaKnown RBP11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Ssbp4Q3U4B1 363 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 A3galt2Q3V1N9 370 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 C1qtnf4Q8R066 326 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Nit1Q8VDK1 323 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Atoh7Q9Z2E5 149 aa11.22□□□□□ -0.61
Clcn3-204ENSMUST00000110301 F5O88783 2183 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 eef1akmt3D3YWP0 232 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Foxl2O88470 375 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Tex30Q3TUU5 225 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm5615Q3UW02 101 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 AtmQ62388 3066 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Gm21778A0A087WNP8 232 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 D930048N14RikA2AA67 225 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 P01796 113 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 P01797 113 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 P01799 113 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 P18530 117 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Wnt10aP70701 417 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Rnf224Q3UIW8 156 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Taar5Q5QD14 337 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Prss41Q920S2 322 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 MmdQ9CQY7 238 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 AgrnA2ASQ1 1950 aa11.21□□□□□ -0.61
Clcn3-204ENSMUST00000110301 Trbv15A0A0A6YYE3 115 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Gm14408E9Q6B9 136 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Gm26965M0QWH4 86 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Igsf11P0C673 428 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Ccl2P10148 148 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Npas1P97459 594 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Acsm5Q8BGA8 578 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Psg16Q8K0U8 395 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Smco4Q9JIS3 59 aa11.21□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Rnf217D3YYI7 515 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Cxcl2P10889 100 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Cdc34Q8CFI2 235 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Olfr1326-ps1A0A140T8J7 311 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 H2-M5A7VMS3 348 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 CckarO08786 436 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 P18526 117 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 ClmQ7TSN2 230 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Try5Q9QUK9 246 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Olfr154Q9QY00 318 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Try4Q9R0T7 246 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Ighv14-4A0A0A6YVR1 117 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Gm6096D3YTY6 151 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Fli1P26323 452 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Gimap1P70224 277 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Spink6Q8BT20 105 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Q8VC23 124 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 MpiQ924M7 423 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Nhp2Q9CRB2 153 aaKnown RBP11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Zfp648D3Z0W3 525 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Olfr39E9PVX1 319 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Atf6bO35451 699 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Mamld1P0C6A2 803 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Olfr143P34985 313 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Npy4rQ61041 375 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Smim12Q78RX3 92 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 OpalinQ7M750 143 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Q80W69 301 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Slc35e1Q8CD26 409 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Mr1Q8HWB0 341 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Uqcr10Q8R1I1 64 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Lipt2Q9D009 231 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Fkbp11Q9D1M7 201 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Tmem239Q9DA47 151 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Arpc1bQ9WV32 372 aaKnown RBP11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Cldn10Q9Z0S6 231 aa11.2□□□□□ -0.62
Clcn3-204ENSMUST00000110301 1700025B11RikA0A087WNZ6 93 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Lnp1A0A1B0GSK3 178 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Olfr1458A0A1L1SSD5 307 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 B1ARW8 110 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Q0VG49 157 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 KncnQ307W7 124 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Sf3a2Q62203 475 aaKnown RBP11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Oraov1Q8CH62 137 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Hspb9Q9DAM3 168 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Rnase4Q9JJH1 148 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Kcnip3Q9QXT8 256 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Fbxl17Q9QZN1 701 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Suclg1Q9WUM5 346 aaKnown RBP11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Cfap54Q8C6S9 3106 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Gm15440D3Z3P4 90 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Ier2P17950 221 aa11.19□□□□□ -0.62
Clcn3-204ENSMUST00000110301 Pgam5Q8BX10 288 aa11.19□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 129.3 ms