RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 MymxQ2Q5T5 84 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm10803Q3TZS6 135 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cox7a2lQ61387 111 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 PianpQ6P1B3 278 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Rtn4rl2Q7M6Z0 420 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 SergefQ80YD6 464 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Nhlrc1Q8BR37 401 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Depp1Q8K2F3 205 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 TdhQ8K3F7 373 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Vmn1r231Q8R2A3 311 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr1420Q8VF55 309 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr1233Q8VGN0 305 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Wwtr1Q9EPK5 395 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cd200r1Q9ES57 326 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Mpdu1Q9R0Q9 247 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Snrnp200Q6P4T2 2136 aaKnown RBP8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm7275E9Q1B3 247 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm4788E9Q8B5 879 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Hnrnpa1P49312 320 aaKnown RBP8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Slc16a11Q5NC32 447 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 NovQ64299 354 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr222Q7TS30 318 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Fam206aQ80ZQ9 193 aaKnown RBP8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Las2Q8CB14 526 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Abhd12Q99LR1 398 aaKnown RBP8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 PpdpfQ9CR37 115 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 AhspQ9CY02 102 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ankrd39Q9D2X0 183 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr1264Q9R0K2 308 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Adam11Q9R1V4 773 aa8.24□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav6-6A0A075B603 114 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav6-7-dv9A0A075B639 125 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr175-ps1A0A140T8K4 308 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ube2dnl1A2AFH1 155 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 5430401F13RikE9Q328 175 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cd27P41272 250 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ccr1l1P51676 356 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Neil2Q6R2P8 329 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr963Q7TRA9 311 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr358Q7TRY5 330 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ttc9cQ810A3 171 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 H2-M10.6Q85ZW5 330 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Plcxd3Q8BLJ3 321 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 MdficQ8BX65 247 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 AdtrpQ8C138 230 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Sulf2Q8CFG0 875 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ube2tQ9CQ37 204 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Hdhd3Q9CYW4 251 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Vstm5Q9D806 199 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Phf7Q9DAG9 307 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gtsf1Q9DAN6 167 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 V1ra8Q9EQ48 279 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Crybb1Q9WVJ5 250 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Prr14lE9Q7C4 1971 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm28845A0A087WR76 214 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Psg18B2RSG7 476 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 F2rl2O08675 369 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Klk1b3P00756 261 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 P01736 120 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm614Q3V2K1 191 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 MaoaQ64133 526 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Rbfox2Q8BP71 449 aaKnown RBP8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Lrp11Q8CB67 483 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Dmrtc2Q8CGW9 370 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 D1Ertd622eQ8VEB3 207 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Prss41Q920S2 322 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ndufb2Q9CPU2 105 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Tspo2Q9CRZ8 162 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr954Q9EQB6 314 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Kcnip2Q9JJ69 270 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Nat6Q9R123 314 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Dock6Q8VDR9 2080 aa8.23□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav6n-6A0A075B6B2 114 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Tcrg-V3A0A0G2JEW2 117 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Usp36B1AQJ2 1098 aaKnown RBP8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 2010315B03RikJ3QK55 433 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Dll3O88516 592 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Jmjd7P0C872 316 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ucp1P12242 307 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Klk1P15947 261 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Atp6v0cP63082 155 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr140Q60878 302 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr107Q7TRK4 309 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Slc25a48Q8BW66 306 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Vmn1r197Q8R265 298 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Sval2Q99N75 144 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cldnd1Q9CQX5 253 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Plpp2Q9DAX2 276 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Kcnip1Q9JJ57 227 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav15-2-dv6-2A0A075B650 123 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav12-1A0N8R1 115 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Esp8F7AMQ8 149 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm20821J3QPJ2 227 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Mtatp6P00848 226 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Runx1Q03347 451 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Q24JP4 165 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr917Q7TRC3 309 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Rpl24Q8BP67 157 aaKnown RBP8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Acer1Q8R4X1 273 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Defb8Q91V82 60 aa8.22□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms