RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Rnase11Q5GAM9 192 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 AmtQ8CFA2 403 aaKnown RBP15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Rpp21Q8R040 150 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 GmppaQ922H4 420 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Slc25a2Q99ML6 265 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tbx21Q9JKD8 530 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Trav6-1A0A075B5Z8 112 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Hist1h2bfP10853 126 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 BC147527Q3V185 167 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Hist1h2bbQ64475 126 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Usf2Q64705 346 aaKnown RBP15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Hist1h2bkQ8CGP1 126 aaKnown RBP15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Hist1h2bpQ8CGP2 126 aaKnown RBP15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 IdnkQ8R0J8 184 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Acaa1bQ8VCH0 424 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Sfxn3Q91V61 321 aa15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Acaa1aQ921H8 424 aaKnown RBP15.31■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Lrrc3cA0A1B0GRI5 255 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Gm14412A2ARR7 526 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tmem92B7ZWI3 162 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Muc3E9PWP7 378 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Bet1lO35153 111 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Pet117P0DJF2 80 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Gstp1P19157 210 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Sftpa1P35242 248 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 G6pcP35576 357 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Sp9Q64HY3 484 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 EtdQ80SW5 59 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr530Q8VFE8 307 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Glrx2Q923X4 156 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Col6a6Q8C6K9 2265 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Gm45800A0A1B0GT24 152 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 G430095P16RikE9Q913 147 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Gm20532G3UXR8 106 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Timp1P12032 205 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Ube2zQ3UE37 356 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 C1qtnf9Q4ZJN1 333 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tmem256Q5F285 113 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Nhlh2Q64221 135 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Zfp273Q7M6W8 501 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 BsxQ810B3 232 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr786Q8VFH8 312 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tmem147Q9CQG6 224 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Fancd2osQ9D4K4 178 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Syt13Q9EQT6 426 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Pfdn5Q9WU28 154 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tusc2Q9WVF8 110 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tubg1P83887 451 aaKnown RBP15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Pate4Q09098 99 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr987Q7TRA2 309 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Slc37a1Q8R070 531 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr641Q8VGX6 312 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Ythdf2Q91YT7 579 aaKnown RBP15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tm2d1Q99MB3 208 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Ly6g6dQ9Z1Q3 135 aa15.3■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Trav5-4A0A075B652 114 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Zfp971A2BFG8 470 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr1328B1ARV2 313 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Gm14288E9Q9W0 88 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Nkx2-8O70584 235 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Neurog3P70661 214 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Rnf224Q3UIW8 156 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 SspnQ62147 216 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tmem106bQ80X71 275 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 9030612E09RikQ8CE20 140 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tmprss11dQ8VHK8 417 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Ms4a6cQ99N08 217 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tcf20Q9EPQ8 1987 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Igkv6-15A0A140T8M5 115 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Ctxnd1A0A1B0GST9 59 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 E430018J23RikE9PZQ8 461 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Klrd1O54707 179 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Ube2g2P60605 165 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Spsb4Q8R5B6 273 aa15.29■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 NacaP70670 2187 aaKnown RBP15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Gabra6P16305 453 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tnfrsf1aP25118 454 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 UngP97931 306 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Lyplal1Q3UFF7 239 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Cdc42ep2Q8JZX9 214 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tex43Q9D9I1 141 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Slurp1Q9Z0K7 110 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Pcnx1Q9QYC1 2344 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Asxl3Q8C4A5 2259 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Trav4-2A0A075B638 110 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 P01790 122 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Sssca1P56873 199 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr91Q7TRL3 312 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 TprkbQ8QZZ7 175 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Cds2Q99L43 444 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 VsirQ9D659 308 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Timm8a1Q9WVA2 97 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Bcl2l10Q9Z0F3 191 aa15.28■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Adcyap1O70176 175 aa15.27■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Asgr2P24721 301 aa15.27■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Olfr143P34985 313 aa15.27■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 StomP54116 284 aa15.27■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Mrpl3Q99N95 348 aa15.27■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 Tnfrsf13bQ9ET35 249 aa15.27■□□□□ 0.04
Ccdc3-201ENSMUST00000027988 TymsP07607 307 aa15.27■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms