RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ythdf2Q91YT7 579 aaKnown RBP13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Flywch2Q9CQE9 139 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Klk4Q9Z0M1 255 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Lhx2Q9Z0S2 406 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Trav6d-5A0A075B6B9 112 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Dcaf10A2AKB9 566 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Colca2F8VPY8 239 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Alox12bO70582 701 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Pax5Q02650 391 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Rbp2Q08652 134 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Zglp1Q1WG82 266 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Spred3Q6P6N5 408 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr987Q7TRA2 309 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Pcgf1Q8R023 259 aaKnown RBP13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 OdamA1E960 273 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Siglec15A7E1W8 342 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Arl16B1ATY8 173 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 TectbO08524 329 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 B2mP01887 119 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Jmjd7P0C872 316 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Meox1P32442 253 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Dpagt1P42867 410 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 ClcP97400 68 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm6899Q3USS0 134 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Reep5Q60870 185 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Spock1Q62288 442 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm10306Q9CUK2 115 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Rnd2Q9QYM5 227 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sfrp4Q9Z1N6 351 aa13.64□□□□□ -0.23
Trim28-201ENSMUST00000005705 Svep1A2AVA0 3567 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Klrd1O54707 179 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 GferP56213 198 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Fa2hQ5MPP0 372 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Taar3Q5QD16 343 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Poc1bQ8BHD1 476 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ighv5-17A0A075B5R1 117 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Lrrc3cA0A1B0GRI5 255 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Znf431E9QAG8 526 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 RelP15307 587 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Klre1Q8CJC7 226 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr281Q8VET6 311 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 4931428L18RikQ9D4S9 127 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 Herpud1Q9JJK5 391 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 St6galnac3Q9WUV2 305 aa13.63□□□□□ -0.23
Trim28-201ENSMUST00000005705 D830044I16RikA0A1D5RM53 117 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Wdr1O88342 606 aaKnown RBP13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Rpl30P62889 115 aaKnown RBP13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 MyocosQ3UWS6 143 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 C1qtnf9Q4ZJN1 333 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Znf474Q6V5K9 347 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Rgs13Q8K443 158 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr1184Q8VG86 311 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Egln1Q91YE3 400 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Mad2l1bpQ9DCX1 276 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr926Q9EQ98 308 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Igkv13-85A0A075B666 115 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Scgb1b10A0A087WPW0 93 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Iglv3A0A0B4J1K5 122 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Zfp109A0A0U1RPC5 652 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 9130019O22RikG3X941 543 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Bcat2O35855 393 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ube2nP61089 152 aaKnown RBP13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Tpt1P63028 172 aaKnown RBP13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Apobec4Q497M3 374 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Cdc42ep2Q8JZX9 214 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr1445Q8VFW9 314 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr167Q8VGJ5 312 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 MrgprdQ91ZB8 321 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Akap6E9Q9K8 2307 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm45800A0A1B0GT24 152 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm17654F7AXR3 209 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ca11O70354 328 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Mpv17P19258 176 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Efna2P52801 209 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Siah2Q06986 325 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Slc25a31Q3V132 320 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Patz1Q5NBY9 687 aaKnown RBP13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Lhfpl1Q80SV1 220 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Vmn1r179Q8R2B4 323 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sh2d2aQ9QXK9 374 aa13.62□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm21778A0A087WNP8 232 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Zfp971A2BFG8 470 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr178E9Q9T3 319 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 3110082J24RikF6Z6Z2 108 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Vmn1r113G3UWI8 307 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm21788J3QNH3 180 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ca5aP23589 299 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Ccr8P56484 353 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gng3P63216 75 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Zfp970Q08BU3 522 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm10384Q3UQ87 92 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Hist2h2beQ64524 126 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Tmbim7Q9D592 302 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Olfr894Q9EQB2 313 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Kcnip1Q9JJ57 227 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Igkv1-132A0A0B4J1H9 120 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Gm15292L7N231 93 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Cr2P19070 1025 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 Sftpa1P35242 248 aa13.61□□□□□ -0.23
Trim28-201ENSMUST00000005705 PilraQ2YFS3 302 aa13.61□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms