RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	ADAMTSL4-AS1	Q5T5F5	129 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523		Q6ZRP5	223 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	TTC9C	Q8N5M4	171 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	BEST4	Q8NFU0	473 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	OR4A5	Q8NH83	315 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	ARL6	Q9H0F7	186 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	OR51E2	Q9H255	320 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	KLF12	Q9Y4X4	402 aa		4.65	□□□□□ -1.67
CASC19-238	ENST00000641523	RYR3	Q15413	4870 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	PVALB	P20472	110 aa	Predicted RBP	4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	NFYA	P23511	347 aa	Predicted RBP	4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	SDC2	P34741	201 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	RPL27A	P46776	148 aa	Known RBP	4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	RAN	P62826	216 aa	Known RBP	4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	LINC00242	Q5T6M2	205 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	IDO2	Q6ZQW0	420 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	SMIM15	Q7Z3B0	74 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	SAMD12	Q8N8I0	201 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	MUC7	Q8TAX7	377 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	TMEM167A	Q8TBQ9	72 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	DYNLRB2	Q8TF09	96 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	RNF167	Q9H6Y7	350 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	MLX	Q9UH92	298 aa		4.64	□□□□□ -1.67
CASC19-238	ENST00000641523	IGKV1D-8	A0A087WSZ0	117 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	GGCT	O75223	188 aa	Known RBP	4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	PPY	P01298	95 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	C8orf88	P0DMB2	117 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	S100G	P29377	79 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	SUB1	P53999	127 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	MFAP2	P55001	183 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	TAS2R46	P59540	309 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	ERVK-16	P61578	105 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	MXD1	Q05195	221 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	C15orf32	Q32M92	178 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	OR2B11	Q5JQS5	317 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	SBSPON	Q8IVN8	264 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	ISOC1	Q96CN7	298 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	S100A16	Q96FQ6	103 aa	Known RBP	4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	TMEM56	Q96MV1	263 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	TM2D3	Q9BRN9	247 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	TUBA4B	Q9H853	241 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	BATF3	Q9NR55	127 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	SLC2A9	Q9NRM0	540 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	BET1L	Q9NYM9	111 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	TAS2R8	Q9NYW2	309 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523	THYN1	Q9P016	225 aa		4.63	□□□□□ -1.67
CASC19-238	ENST00000641523		A0A087X002	238 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	IGKV1D-13	A0A0B4J2D9	117 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523		A0A1B0GWB2	263 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	ZNF705E	A8MWA4	302 aa	Predicted RBP	4.62	□□□□□ -1.67
CASC19-238	ENST00000641523		F6UB75	175 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523		J3QRK9	145 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	LGALS9	O00182	355 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	HPRT1	P00492	218 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	APELA	P0DMC3	54 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	IGKV1-13	P0DP09	117 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	DEFA4	P12838	97 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	AP2S1	P53680	142 aa	Predicted RBP	4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	CD164	Q04900	197 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	NEDD8	Q15843	81 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	MRGPRG-AS1	Q2M3A8	158 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	NOTCH2NL	Q7Z3S9	236 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	SLC25A38	Q96DW6	304 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	COMMD5	Q9GZQ3	224 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	COMMD9	Q9P000	198 aa		4.62	□□□□□ -1.67
CASC19-238	ENST00000641523	TRBV7-1	A0A0A6YYK4	115 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	TYMS	P04818	313 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	RPL30	P62888	115 aa	Known RBP	4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	KLK9	Q2XQG4	91 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	UBE2NL	Q5JXB2	153 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	TMEM69	Q5SWH9	247 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	C10orf55	Q5SWW7	151 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	AADACL3	Q5VUY0	350 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	LPCAT3	Q6P1A2	487 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	IL34	Q6ZMJ4	242 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	SLC16A13	Q7RTY0	426 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	GPHB5	Q86YW7	130 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	MARC2	Q969Z3	335 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	LITAF	Q99732	161 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	TMEM208	Q9BTX3	173 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	KLK9	Q9UKQ9	250 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523		A0A087WXM4	84 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	TINCR	A0A1B0GVN0	87 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	SMIM31	A0A1B0GVY4	71 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523		A8MWP6	167 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	TRBV12-3	P01733	135 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	PRH1	P02810	166 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	FOLR2	P14207	255 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	GALR1	P47211	349 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	FXYD4	P59646	89 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	ZNF45	Q02386	682 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	CASC10	Q5T4H9	136 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	LCE1A	Q5T7P2	110 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	OR5H6	Q8NGV6	325 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	OR5H2	Q8NGV7	314 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	TSC22D3	Q99576	134 aa		4.61	□□□□□ -1.67
CASC19-238	ENST00000641523	C20orf144	Q9BQM9	153 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms