RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 KPNA3O00505 521 aaPredicted RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 ERC2-IT1O76042 136 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 ERP29P30040 261 aaKnown RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 SRIP30626 198 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 RNASE4P34096 147 aaKnown RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 HIST1H3AP68431 136 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 H3F3AP84243 136 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 CIRBPQ14011 172 aaKnown RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 Q6ZS92 163 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 ZNF833PQ6ZTB9 187 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 PDZD9Q8IXQ8 264 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 C12orf45Q8N5I9 185 aaPredicted RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 OR10K1Q8NGX5 313 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 RNASE7Q9H1E1 156 aaKnown RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 WFDC10AQ9H1F0 79 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 RNF122Q9H9V4 155 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 UCK1Q9HA47 277 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.16□□□□□ -2.38
AP3S1-209ENST00000640413 PRELID3BQ9Y3B1 194 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 BIRC6Q9NR09 4857 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 TRANK1O15050 2925 aa0.16□□□□□ -2.38
AP3S1-209ENST00000640413 KIAA1549Q9HCM3 1950 aa0.15□□□□□ -2.38
AP3S1-209ENST00000640413 ASCC3Q8N3C0 2202 aaKnown RBP0.15□□□□□ -2.38
AP3S1-209ENST00000640413 CST8O60676 142 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 PPYP01298 95 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 CXCL8P10145 99 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 COX7CP15954 63 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 HOXA6P31267 233 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 SPINT3P49223 89 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 PIGPP57054 158 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 AESQ08117 197 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 C6orf52Q5T4I8 152 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 C22orf39Q6P5X5 142 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 STAG3L4Q8TBR4 150 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 PPP1R14BQ96C90 147 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 PARD6GQ9BYG4 376 aaPredicted RBP0.15□□□□□ -2.39
AP3S1-209ENST00000640413 PBOV1Q9GZY1 135 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 TMEM133Q9H2Q1 129 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 ZNF292O60281 2723 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 MYH10P35580 1976 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 TENM4Q6N022 2769 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 HERC2O95714 4834 aa0.15□□□□□ -2.39
AP3S1-209ENST00000640413 IGF2RP11717 2491 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 FMN1Q68DA7 1419 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 UTP20O75691 2785 aaKnown RBP0.14□□□□□ -2.39
AP3S1-209ENST00000640413 ATRQ13535 2644 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 IGSF10Q6WRI0 2623 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 TRAV23DV6A0A075B6W5 121 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 M0R233 179 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 SERPINB9P50453 376 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 ZNF137PP52743 207 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 DSCR4P56555 118 aaPredicted RBP0.14□□□□□ -2.39
AP3S1-209ENST00000640413 FXYD6P3P58550 94 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 RANP62826 216 aaKnown RBP0.14□□□□□ -2.39
AP3S1-209ENST00000640413 UBE2BP63146 152 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 CDK6Q00534 326 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 SPA17Q15506 151 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 TMEM97Q5BJF2 176 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 GNPDA2Q8TDQ7 276 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 MUCL1Q96DR8 90 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 BTF3L4Q96K17 158 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 KIFC1Q9BW19 673 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 OR52A1Q9UKL2 312 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 AKAP13Q12802 2813 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 KIF1BO60333 1816 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 MYH7BA7E2Y1 1941 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 HEATR1Q9H583 2144 aaKnown RBP0.14□□□□□ -2.39
AP3S1-209ENST00000640413 ASH1LQ9NR48 2969 aaKnown RBP0.14□□□□□ -2.39
AP3S1-209ENST00000640413 FAT3Q8TDW7 4589 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 OBSL1O75147 1896 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 APCP25054 2843 aa0.14□□□□□ -2.39
AP3S1-209ENST00000640413 NBEAL1Q6ZS30 2694 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 DNHD1Q96M86 4753 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 E7EUB6 86 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 C17orf112F2Z3M2 114 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 JMJD7-PLA2G4BH0Y9G9 81 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 ROMO1P60602 79 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 ITGB3BPQ13352 177 aaPredicted RBP0.13□□□□□ -2.39
AP3S1-209ENST00000640413 RRN3P1Q2M238 152 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 SPATA45Q537H7 98 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 GRINAQ7Z429 371 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 RAB37Q96AX2 223 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 GGACTQ9BVM4 153 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 TMEM126AQ9H061 195 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 OPTCQ9UBM4 332 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 FRAS1Q86XX4 4008 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 CACNA1HO95180 2353 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 CFAP46Q8IYW2 2715 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 CITO14578 2027 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 SIP14410 1827 aa0.13□□□□□ -2.39
AP3S1-209ENST00000640413 UBR5O95071 2799 aaPredicted RBP0.12□□□□□ -2.39
AP3S1-209ENST00000640413 CEP290O15078 2479 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 CEP295Q9C0D2 2601 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 SPG11Q96JI7 2443 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 ADCY9O60503 1353 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 TRAV4A0A0B4J268 109 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 TRBV30A0A0K0K1B3 111 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 K7EIL1 84 aa0.12□□□□□ -2.39
AP3S1-209ENST00000640413 GGCTO75223 188 aaKnown RBP0.12□□□□□ -2.39
AP3S1-209ENST00000640413 NIPSNAP2O75323 286 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms