RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 COL4A1P02462 1669 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 DIDO1Q9BTC0 2240 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 OVOS2A0A0G2JMS6 1433 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 DISP2A7MBM2 1401 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 FMN1Q68DA7 1419 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 ERICH3Q5RHP9 1530 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 MYH10P35580 1976 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 NALCNQ8IZF0 1738 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TRBV20OR9-2A0A075B6H5 130 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TRAV7A0A075B6U4 112 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TRAV30A0A087WSZ9 112 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 A0A087WX48 190 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 IGHV1-18A0A0C4DH31 117 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TMEM269A0A1B0GVZ9 245 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 IFITM5A6NNB3 132 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 CLDN25C9JDP6 229 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 LYZL6O75951 148 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 ZNF682O95780 498 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 APODP05090 189 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 CSN2P05814 226 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 GPX1P07203 203 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 AKAIN1P0CW23 69 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 RPL7P18124 248 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 RPS3P23396 243 aaKnown RBP eCLIP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 KDELR1P24390 212 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 S100A4P26447 101 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 PSMB8P28062 276 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 ATP5G3P48201 142 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 EVX1P49640 407 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 DEFA3P59666 94 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 RPL30P62888 115 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 EIF3IQ13347 325 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 MSMO1Q15800 293 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 RTL8BQ17RB0 113 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 COL5A1-AS1Q5SY13 56 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 BCL2L15Q5TBC7 163 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 Q6Q795 121 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 ALKAL1Q6UXT8 129 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 Q6ZS49 121 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 SSX8Q7RTT4 187 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TRAPPC6BQ86SZ2 158 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 OR52R1Q8NGF1 315 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 OR51A4Q8NGJ6 313 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 OR5H6Q8NGV6 325 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 SFT2D1Q8WV19 159 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 COPS9Q8WXC6 57 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TMEM106AQ96A25 262 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 BORCS8Q96FH0 119 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 C2orf50Q96LR7 162 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TSPAN32Q96QS1 320 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 SLC25A21Q9BQT8 299 aaPredicted RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 PRADC1Q9BSG0 188 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 RTL8AQ9BWD3 113 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 WDR61Q9GZS3 305 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 CST9LQ9H4G1 147 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 OR5AC2Q9NZP5 309 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 CCDC167Q9P0B6 97 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 V9GYS6 101 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TCOF1Q13428 1488 aaKnown RBP1.16□□□□□ -2.22
CCDC7-216ENST00000640058 TTC37Q6PGP7 1564 aa1.16□□□□□ -2.22
CCDC7-216ENST00000640058 COL6A6A6NMZ7 2263 aa1.15□□□□□ -2.22
CCDC7-216ENST00000640058 RGS12O14924 1447 aa1.15□□□□□ -2.22
CCDC7-216ENST00000640058 TNS3Q68CZ2 1445 aa1.15□□□□□ -2.22
CCDC7-216ENST00000640058 NSD3Q9BZ95 1437 aa1.15□□□□□ -2.22
CCDC7-216ENST00000640058 TRAV4A0A0B4J268 109 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 A0A0J9YY10 115 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 SMIM31A0A1B0GVY4 71 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 TRDV1A0A1B0GX56 115 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 A0A1B0GX78 115 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 IRGMA1A4Y4 181 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 DPRXA6NFQ7 191 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 C1orf196B1AJZ1 125 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 H7C2G1 150 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 CST7O76096 145 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 NCR2O95944 276 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 SMIM10L2AP0DMW4 78 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 SMIM10L2BP0DMW5 78 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H1DP16402 221 aaKnown RBP1.15□□□□□ -2.23
CCDC7-216ENST00000640058 NFYBP25208 207 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 SRIP30626 198 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 SDC2P34741 201 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 RPL28P46779 137 aaKnown RBP1.15□□□□□ -2.23
CCDC7-216ENST00000640058 TPPP2P59282 170 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 LSM3P62310 102 aaKnown RBP1.15□□□□□ -2.23
CCDC7-216ENST00000640058 CDK6Q00534 326 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 MYL5Q02045 173 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 VMA21Q3ZAQ7 101 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 C6orf52Q5T4I8 152 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 FKBP1CQ5VVH2 108 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 SCIMPQ6UWF3 145 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 COA5Q86WW8 74 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 OR4S1Q8NGB4 309 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF563Q8TA94 476 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 MRPL30Q8TCC3 161 aaKnown RBP1.15□□□□□ -2.23
CCDC7-216ENST00000640058 KLK6Q92876 244 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 TOMM6Q96B49 74 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM191AQ9H0A3 160 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 FBXL12Q9NXK8 326 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 PCTPQ9UKL6 214 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms