RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ZNF674Q2M3X9 581 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 ACOT6Q3I5F7 207 aaPredicted RBP4.66□□□□□ -1.66
ATM-229ENST00000639953 HIST2H2BDQ6DRA6 164 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 FAM71F2Q6NXP2 309 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 C12orf54Q6X4T0 127 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 Q6ZSV7 163 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 SLC16A13Q7RTY0 426 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 C16orf82Q7Z2V1 217 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 TMEM144Q7Z5S9 345 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 Q8N6K4 173 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 TEX45Q8NA69 505 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 OR4C13Q8NGP0 309 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 OR5R1Q8NH85 324 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 RPEQ96AT9 228 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 ACY3Q96HD9 319 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 GGACTQ9BVM4 153 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 SLC25A2Q9BXI2 301 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 PARLQ9H300 379 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 SAV1Q9H4B6 383 aaPredicted RBP4.66□□□□□ -1.66
ATM-229ENST00000639953 TUBA4BQ9H853 241 aa4.66□□□□□ -1.66
ATM-229ENST00000639953 METTL1Q9UBP6 276 aaKnown RBP4.66□□□□□ -1.66
ATM-229ENST00000639953 COL6A5A8TX70 2615 aa4.65□□□□□ -1.66
ATM-229ENST00000639953 H3BTX0 84 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 I3L2K1 104 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 K7EN84 100 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 CYB5BO43169 146 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 NDUFB4O95168 129 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 NDUFB8O95169 186 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 OR5G3P0C626 314 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 PYYP10082 97 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 CEACAM3P40198 252 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 RPL27AP46776 148 aaKnown RBP4.65□□□□□ -1.67
ATM-229ENST00000639953 COMPP49747 757 aaPredicted RBP4.65□□□□□ -1.67
ATM-229ENST00000639953 RND2P52198 227 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 KRTAP10-3P60369 221 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 SNRPEP62304 92 aaKnown RBP4.65□□□□□ -1.67
ATM-229ENST00000639953 MEF2BQ02080 365 aaPredicted RBP4.65□□□□□ -1.67
ATM-229ENST00000639953 TNXAQ16473 311 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 TIGITQ495A1 244 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 CYP2G1PQ6ZSU1 146 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 IQCF2Q8IXL9 164 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 C15orf54Q8N8G6 183 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 THAP8Q8NA92 274 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 NECAP1Q8NC96 275 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 OR5T1Q8NG75 326 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 OR5B3Q8NH48 314 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 OR4A5Q8NH83 315 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 OCC1Q8TAD7 63 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 LINC00479Q96M42 142 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 C17orf77Q96MU5 243 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 UHRF2Q96PU4 802 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 ASCL2Q99929 193 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 SMDT1Q9H4I9 107 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 RAB9BQ9NP90 201 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 AMMECR1Q9Y4X0 333 aaPredicted RBP4.65□□□□□ -1.67
ATM-229ENST00000639953 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.67
ATM-229ENST00000639953 PIGBOS1A0A0B4J2F0 54 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 C11orf94C9JXX5 98 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 C17orf112F2Z3M2 114 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 K7EIM0 57 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 NDUFA7O95182 113 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 OR10J4P0C629 311 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 CTRB1P17538 263 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 BRS3P32247 399 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 MC5RP33032 325 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 GPX4P36969 197 aaPredicted RBP4.64□□□□□ -1.67
ATM-229ENST00000639953 BLCAPP62952 87 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 HES1Q14469 280 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 TMEM241Q24JQ0 296 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 VMA21Q3ZAQ7 101 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 FAM78BQ5VT40 261 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 GFI1BQ5VTD9 330 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 CST9LP1Q5W188 147 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 CTRB2Q6GPI1 263 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 C3orf56Q8N813 242 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 ZNF709Q8N972 641 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 NPBQ8NG41 125 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 LINC01006Q8NI28 216 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 FRZBQ92765 325 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 FXYD5Q96DB9 178 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 HSPB9Q9BQS6 159 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 PYGO2Q9BRQ0 406 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 COMMD5Q9GZQ3 224 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 ZNF702PQ9H963 129 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 ENY2Q9NPA8 101 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 FUT9Q9Y231 359 aa4.64□□□□□ -1.67
ATM-229ENST00000639953 A0A087WWC5 75 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 CLPSL1A2RUU4 121 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 C5orf52A6NGY3 159 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 OOSP1A8MZH6 123 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 GGTLC3B5MD39 225 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 FNDC10F2Z333 226 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 TSPAN9O75954 239 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 NDUFA3O95167 84 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 MT-CO2P00403 227 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 IGKV1-17P01599 117 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 IGHV3-23P01764 117 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 MBP02144 154 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 MT-ND4LP03901 98 aa4.63□□□□□ -1.67
ATM-229ENST00000639953 TMEM11P17152 192 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms