RNA–Protein interactions for RNA: ENST00000638546.1

HCG27-205, Transcript of HLA complex group 27, humanhuman

TSL 1 (best)

Gene HCG27, Length 1,641 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-205ENST00000638546 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 FAM223BA6NKX1 122 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 PPP5D1E7EU14 171 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 FAM3BP58499 235 aaPredicted RBP12.9□□□□□ -0.34
HCG27-205ENST00000638546 SNRPEP62304 92 aaKnown RBP12.9□□□□□ -0.34
HCG27-205ENST00000638546 DEFB112Q30KQ8 113 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 FAM223AQ8IWN6 122 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 BCL6BQ8N143 479 aaPredicted RBP12.9□□□□□ -0.34
HCG27-205ENST00000638546 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 IL36BQ9NZH7 164 aa12.9□□□□□ -0.34
HCG27-205ENST00000638546 TRAV34A0A0B4J273 112 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 C5orf52A6NGY3 159 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 ISLRO14498 428 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 BRI3O95415 125 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 TYMSP04818 313 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 MGST1P10620 155 aaKnown RBP12.89□□□□□ -0.35
HCG27-205ENST00000638546 UBE2G1P62253 170 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 CLEC19AQ6UXS0 136 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 LINC00527Q9UJ94 153 aa12.89□□□□□ -0.35
HCG27-205ENST00000638546 NBPF19A0A087WUL8 3843 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 H3BUA1 57 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 AP4M1O00189 453 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 BMPR1BO00238 502 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 TCRAP04437 139 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 TOMM20LQ6UXN7 152 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 CMTM2Q8TAZ6 248 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 Q96MF0 132 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 CCDC140Q96MF4 163 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 RPH3ALQ9UNE2 315 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 V9GYV3 84 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 FBN2P35556 2912 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 TRAV9-1A0A075B6T8 112 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 SLC17A3O00476 420 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 FSHBP01225 129 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 TRGV3P03979 118 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 FMC1Q96HJ9 113 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 ZNF414Q96IQ9 312 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 GNB4Q9HAV0 340 aa12.88□□□□□ -0.35
HCG27-205ENST00000638546 ABCA1O95477 2261 aa12.87□□□□□ -0.35
HCG27-205ENST00000638546 ZNF320A2RRD8 509 aa12.87□□□□□ -0.35
HCG27-205ENST00000638546 RPL7P18124 248 aaKnown RBP12.87□□□□□ -0.35
HCG27-205ENST00000638546 BLCAPP62952 87 aa12.87□□□□□ -0.35
HCG27-205ENST00000638546 EXOC3-AS1Q8N2X6 119 aa12.87□□□□□ -0.35
HCG27-205ENST00000638546 SMIM12Q96EX1 92 aa12.87□□□□□ -0.35
HCG27-205ENST00000638546 C17orf77Q96MU5 243 aa12.87□□□□□ -0.35
HCG27-205ENST00000638546 PHOX2AO14813 284 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 PPIFP30405 207 aaKnown RBP12.86□□□□□ -0.35
HCG27-205ENST00000638546 PDE6HQ13956 83 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 RPEL1Q2QD12 228 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 CYB5R2Q6BCY4 276 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 SIGLEC15Q6ZMC9 328 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 KRTAP1-3Q8IUG1 177 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 FRZBQ92765 325 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 GPR82Q96P67 336 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 RNASE7Q9H1E1 156 aaKnown RBP12.86□□□□□ -0.35
HCG27-205ENST00000638546 ZFAND3Q9H8U3 227 aa12.86□□□□□ -0.35
HCG27-205ENST00000638546 UBE2CO00762 179 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 IGHV4-59P01825 116 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 IER3P46695 156 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 RELQ04864 619 aaPredicted RBP12.85□□□□□ -0.35
HCG27-205ENST00000638546 SMUG1Q53HV7 270 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 IBA57Q5T440 356 aaKnown RBP12.85□□□□□ -0.35
HCG27-205ENST00000638546 C9orf139Q6ZV77 190 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 FAM231DQ6ZW35 169 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 OR5R1Q8NH85 324 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 USMG5Q96IX5 58 aa12.85□□□□□ -0.35
HCG27-205ENST00000638546 IGHV3-35A0A0C4DH35 117 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BKO60814 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BJP06899 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 TRGC1P0CF51 173 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BOP23527 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BBP33778 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 RAB9AP51151 201 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BDP58876 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 TPPP2P59282 170 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BCP62807 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 PSG9Q00887 426 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST2H2BEQ16778 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.84□□□□□ -0.35
HCG27-205ENST00000638546 OR8I2Q8N0Y5 310 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BHQ93079 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 NOL4LQ96MY1 436 aaPredicted RBP12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BNQ99877 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 HIST1H2BMQ99879 126 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 CSMD2Q7Z408 3487 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 NDUFA6P56556 154 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 Q6ZS46 218 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 ZNF580Q9UK33 172 aa12.84□□□□□ -0.35
HCG27-205ENST00000638546 GATCO43716 136 aaKnown RBP12.83□□□□□ -0.36
HCG27-205ENST00000638546 LTAP01374 205 aa12.83□□□□□ -0.36
HCG27-205ENST00000638546 RPL15P61313 204 aaKnown RBP12.83□□□□□ -0.36
HCG27-205ENST00000638546 GOLT1AQ6ZVE7 132 aa12.83□□□□□ -0.36
HCG27-205ENST00000638546 SGK494Q96LW2 274 aa12.83□□□□□ -0.36
HCG27-205ENST00000638546 MLST8Q9BVC4 326 aa12.83□□□□□ -0.36
HCG27-205ENST00000638546 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
HCG27-205ENST00000638546 SERTAD4Q9NUC0 356 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms