RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 RAB5CP51148 216 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 RPS28P62857 69 aaKnown RBP1.08□□□□□ -2.24
GYPB-216ENST00000638448 HBBP68871 147 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 DEFB113Q30KQ7 82 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 TMEM128Q5BJH2 165 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 KRTAP26-1Q6PEX3 210 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 C2orf82Q6UX34 121 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 OR2T35Q8NGX2 323 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 TMEM254Q8TBM7 123 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 SKA2Q8WVK7 121 aaPredicted RBP1.08□□□□□ -2.24
GYPB-216ENST00000638448 CARD19Q96LW7 228 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 MCEEQ96PE7 176 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 REG4Q9BYZ8 158 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 LRTM1Q9HBL6 345 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 SPANXCQ9NY87 97 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 RASL12Q9NYN1 266 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 ASB4Q9Y574 426 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 SNURFQ9Y675 71 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 NISCHQ9Y2I1 1504 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 ADGRB2O60241 1585 aa1.08□□□□□ -2.24
GYPB-216ENST00000638448 TRAPPC8Q9Y2L5 1435 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 MYH11P35749 1972 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 SCN10AQ9Y5Y9 1956 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 TRAV27A0A087WT01 109 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 A0A087WX48 190 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 TRDV1A0A1B0GX56 115 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 TCRBV4S1A1TA0A5B7 111 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 TMBIM6P55061 237 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 ARPP19P56211 112 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 EIF3IQ13347 325 aaKnown RBP1.07□□□□□ -2.24
GYPB-216ENST00000638448 CROCCP2Q86T23 111 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 AKAP14Q86UN6 197 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 TP53RKQ96S44 253 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 TCEAL2Q9H3H9 227 aaPredicted RBP1.07□□□□□ -2.24
GYPB-216ENST00000638448 OTORQ9NRC9 128 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 NDUFAF1Q9Y375 327 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 RNF11Q9Y3C5 154 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 HSPB11Q9Y547 144 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 RTL9Q8NET4 1388 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 SDK1Q7Z5N4 2213 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 COL4A5P29400 1685 aa1.07□□□□□ -2.24
GYPB-216ENST00000638448 HEATR5AQ86XA9 2040 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 CEP164Q9UPV0 1460 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 GBF1Q92538 1859 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 IGKV2-40A0A087WW87 121 aaPredicted RBP1.06□□□□□ -2.24
GYPB-216ENST00000638448 TRAV3A0A0B4J244 114 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 TSTD3H0UI37 97 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 INE1O15225 51 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 HCRTO43612 131 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 IGKV2D-40P01614 121 aaPredicted RBP1.06□□□□□ -2.24
GYPB-216ENST00000638448 CXCL1P09341 107 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 KLRD1Q13241 179 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 CDK5R1Q15078 307 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 C4orf22Q6V702 233 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 PYDC1Q8WXC3 89 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 BORCS8Q96FH0 119 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 LINC00526Q96FQ7 95 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 ZNF714Q96N38 554 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 RETNLBQ9BQ08 111 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 EFCAB11Q9BUY7 163 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 CRCT1Q9UGL9 99 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 NAT8BQ9UHF3 227 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 GINS2Q9Y248 185 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 TRPM1Q7Z4N2 1603 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 BCL9O00512 1426 aa1.06□□□□□ -2.24
GYPB-216ENST00000638448 IGKV3-7A0A075B6H7 116 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 IGHV1-58A0A0C4DH39 117 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 TRBV7-6A0A0J9YX20 115 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 KPNA4O00629 521 aaPredicted RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 RER1O15258 196 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 IGLV1-51P01701 117 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 ARL14EPLP0DKL9 152 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 ZNF93P35789 620 aaPredicted RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 POLR2HP52434 150 aaKnown RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 CDK6Q00534 326 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 MSMO1Q15800 293 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 SAMD13Q5VXD3 122 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 ZNF833PQ6ZTB9 187 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 Q8N814 137 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 ZNF431Q8TF32 576 aaPredicted RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 PATE1Q8WXA2 126 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 CHCHD1Q96BP2 118 aaKnown RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 RMND5BQ96G75 393 aaPredicted RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 HYLS1Q96M11 299 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 MRPL40Q9NQ50 206 aaKnown RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 C19orf12Q9NSK7 152 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 KLK9Q9UKQ9 250 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 MED31Q9Y3C7 131 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 SORL1Q92673 2214 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 COL11A1P12107 1806 aaPredicted RBP1.05□□□□□ -2.24
GYPB-216ENST00000638448 RFX7Q2KHR2 1363 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 ANKRD30AQ9BXX3 1397 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 TECPR2O15040 1411 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 PLXND1Q9Y4D7 1925 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 CR1P17927 2039 aa1.05□□□□□ -2.24
GYPB-216ENST00000638448 FREM1Q5H8C1 2179 aa1.04□□□□□ -2.24
GYPB-216ENST00000638448 BAZ2BQ9UIF8 2168 aaKnown RBP1.04□□□□□ -2.24
GYPB-216ENST00000638448 PBRM1Q86U86 1689 aa1.04□□□□□ -2.24
GYPB-216ENST00000638448 ECM29Q5VYK3 1845 aa1.04□□□□□ -2.24
GYPB-216ENST00000638448 IGKV2-29A2NJV5 120 aaPredicted RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms