RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 NFE4Q86UQ8 179 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 PDPNQ86YL7 162 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 SBSPONQ8IVN8 264 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.18□□□□□ -2.06
VIM-210ENST00000637053 DAND5Q8N907 189 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 OR10G2Q8NGC3 310 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 MUCL1Q96DR8 90 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 PGLYRP2Q96PD5 576 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 AMELYQ99218 206 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 VGLL1Q99990 258 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 PMCHL2Q9BQD1 86 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 CHAC1Q9BUX1 264 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 OCR1Q9BZK8 76 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 DPH3P1Q9H4G8 78 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 TNFRSF19Q9NS68 423 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 NDUFB11Q9NX14 153 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 DPM3Q9P2X0 92 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 HHLA3Q9XRX5 114 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 DENND4CQ5VZ89 1909 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 LOXHD1Q8IVV2 1947 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 ALPK3Q96L96 1907 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 GREB1LQ9C091 1923 aaPredicted RBP2.18□□□□□ -2.06
VIM-210ENST00000637053 MYH4Q9Y623 1939 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 ADGRL1O94910 1474 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 DIP2BQ9P265 1576 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 NOTCH3Q9UM47 2321 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 NLRC5Q86WI3 1866 aa2.18□□□□□ -2.06
VIM-210ENST00000637053 CUX1P39880 1505 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 CLASP1Q7Z460 1538 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ABCA9Q8IUA7 1624 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 MADDQ8WXG6 1647 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 SPHKAPQ2M3C7 1700 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 PARP14Q460N5 1801 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 NUP205Q92621 2012 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 SCN2AQ99250 2005 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 TRAV1-1A0A0B4J248 108 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 IGLV5-39A0A0G2JS06 123 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 TRBV7-7A0A0K0K1E9 115 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 A0A1B0GW54 56 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 RPL37AP8A6NKH3 93 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 NTN3O00634 580 aaPredicted RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 ZNF324O75467 553 aaPredicted RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 SLC25A14O95258 325 aaPredicted RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 ZNF688P0C7X2 276 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ZNF32P17041 273 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 COL8A2P25067 703 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 NANOS2P60321 138 aaKnown RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 PRR4Q16378 134 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ZNF678Q5SXM1 525 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ZNF497Q6ZNH5 498 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 C18orf65Q6ZTR6 163 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 CD177Q8N6Q3 437 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 SLC25A29Q8N8R3 303 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 NRACQ8N912 160 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 C15orf53Q8NAA6 179 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 MPLKIPQ8TAP9 179 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 FAM213BQ8TBF2 198 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ITLN1Q8WWA0 313 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 PPDPFLQ8WWR9 84 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ITLN2Q8WWU7 325 aaPredicted RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 ZNF714Q96N38 554 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 CHCHD5Q9BSY4 110 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 NPCDR1Q9BY65 106 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 RPRD2Q5VT52 1461 aaKnown RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 LTN1O94822 1766 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 TCF20Q9UGU0 1960 aaKnown RBP2.17□□□□□ -2.06
VIM-210ENST00000637053 MIA3Q5JRA6 1907 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 KNDC1Q76NI1 1749 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 KIAA1210Q9ULL0 1709 aa2.17□□□□□ -2.06
VIM-210ENST00000637053 ATG2BQ96BY7 2078 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 RALGAPA2Q2PPJ7 1873 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 CTTNBP2Q8WZ74 1663 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 ADGRB1O14514 1584 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 SETBP1Q9Y6X0 1596 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 COL1A1P02452 1464 aaPredicted RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 PLA2R1Q13018 1463 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGHV3OR16-10A0A075B7F0 116 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGHV4-30-2A0A087WSY4 118 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGHV3-74A0A0B4J1X5 117 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGHV3-16A0A0C4DH30 117 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 MUC21A0A140T8X8 626 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 KRTAP4-16G5E9R7 235 aaPredicted RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 SDCBPO00560 298 aaPredicted RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 LY6G6DO95868 133 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGKV1-39P01597 117 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGKCP01834 107 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGKV1-16P04430 117 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IGKV1D-39P04432 117 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 IL5P05113 134 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 SFTA3P0C7M3 94 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 MT3P25713 68 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 LMO2P25791 158 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 FAUP35544 74 aaKnown RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 SSR2P43308 183 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 LSM3P62310 102 aaKnown RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 BLCAPP62952 87 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms