RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 PROK2Q9HC23 129 aa2.54□□□□□ -2
NEB-220ENST00000618972 F8P00451 2351 aa2.54□□□□□ -2
NEB-220ENST00000618972 CCL3P10147 92 aa2.54□□□□□ -2
NEB-220ENST00000618972 KLRD1Q13241 179 aa2.54□□□□□ -2
NEB-220ENST00000618972 EFNB3Q15768 340 aa2.54□□□□□ -2
NEB-220ENST00000618972 CEND1Q8N111 149 aa2.54□□□□□ -2
NEB-220ENST00000618972 FOXI1Q12951 378 aa2.54□□□□□ -2
NEB-220ENST00000618972 LINC00173Q6ZV60 143 aa2.54□□□□□ -2
NEB-220ENST00000618972 C4AP0C0L4 1744 aa2.54□□□□□ -2
NEB-220ENST00000618972 C4BP0C0L5 1744 aa2.54□□□□□ -2
NEB-220ENST00000618972 KNCNA6PVL3 124 aa2.54□□□□□ -2
NEB-220ENST00000618972 NPSP0C0P6 89 aa2.54□□□□□ -2
NEB-220ENST00000618972 CT55Q8WUE5 264 aa2.54□□□□□ -2
NEB-220ENST00000618972 TRAV13-1A0A0B4J241 112 aa2.53□□□□□ -2
NEB-220ENST00000618972 NPC2P61916 151 aa2.53□□□□□ -2
NEB-220ENST00000618972 PIFOQ8TCI5 191 aa2.53□□□□□ -2
NEB-220ENST00000618972 NPIPB3Q92617 1050 aa2.53□□□□□ -2
NEB-220ENST00000618972 SMRP1Q8NCR6 262 aa2.53□□□□□ -2
NEB-220ENST00000618972 Q96M66 194 aa2.53□□□□□ -2
NEB-220ENST00000618972 MCM3APO60318 1980 aa2.53□□□□□ -2
NEB-220ENST00000618972 DUSP14O95147 198 aaKnown RBP2.53□□□□□ -2
NEB-220ENST00000618972 TEN1Q86WV5 123 aa2.53□□□□□ -2
NEB-220ENST00000618972 LYPD6Q86Y78 171 aa2.53□□□□□ -2
NEB-220ENST00000618972 TAF1P21675 1872 aa2.53□□□□□ -2
NEB-220ENST00000618972 PKD1L3Q7Z443 1732 aa2.53□□□□□ -2
NEB-220ENST00000618972 NPIPB11E5RHQ5 1161 aa2.53□□□□□ -2
NEB-220ENST00000618972 SIPA1L3O60292 1781 aaPredicted RBP2.53□□□□□ -2
NEB-220ENST00000618972 GRIFINA4D1Z8 144 aa2.53□□□□□ -2
NEB-220ENST00000618972 CGB1A6NKQ9 187 aa2.53□□□□□ -2
NEB-220ENST00000618972 C17orf98A8MV24 154 aa2.53□□□□□ -2
NEB-220ENST00000618972 DUX3Q96PT4 197 aa2.53□□□□□ -2
NEB-220ENST00000618972 VWC2LB2RUY7 222 aa2.53□□□□□ -2
NEB-220ENST00000618972 PHRF1Q9P1Y6 1649 aaKnown RBP2.53□□□□□ -2
NEB-220ENST00000618972 TRAV17A0A0B4J275 112 aa2.53□□□□□ -2
NEB-220ENST00000618972 Q6ZPA2 131 aa2.53□□□□□ -2
NEB-220ENST00000618972 GOLT1AQ6ZVE7 132 aa2.53□□□□□ -2
NEB-220ENST00000618972 GATA2P23769 480 aaPredicted RBP2.53□□□□□ -2
NEB-220ENST00000618972 PSG4Q00888 419 aa2.53□□□□□ -2
NEB-220ENST00000618972 ZCCHC24Q8N2G6 241 aaKnown RBP2.53□□□□□ -2
NEB-220ENST00000618972 PRR19A6NJB7 356 aa2.53□□□□□ -2
NEB-220ENST00000618972 C1orf53Q5VUE5 145 aa2.53□□□□□ -2
NEB-220ENST00000618972 CALYQ9NYX4 217 aa2.53□□□□□ -2
NEB-220ENST00000618972 POLR2AP24928 1970 aaKnown RBP2.53□□□□□ -2
NEB-220ENST00000618972 C1orf147Q96MC9 270 aaPredicted RBP2.53□□□□□ -2
NEB-220ENST00000618972 PHLPP1O60346 1717 aa2.53□□□□□ -2
NEB-220ENST00000618972 SIGLEC1Q9BZZ2 1709 aa2.53□□□□□ -2
NEB-220ENST00000618972 CGAP01215 116 aa2.53□□□□□ -2
NEB-220ENST00000618972 GTSF1Q8WW33 167 aa2.53□□□□□ -2
NEB-220ENST00000618972 RIMBP3CA6NJZ7 1639 aa2.53□□□□□ -2
NEB-220ENST00000618972 RIMBP3BA6NNM3 1639 aa2.53□□□□□ -2
NEB-220ENST00000618972 RIMBP3Q9UFD9 1639 aa2.53□□□□□ -2
NEB-220ENST00000618972 TRAV21A0A0B4J279 112 aa2.53□□□□□ -2
NEB-220ENST00000618972 NPFFO15130 113 aa2.53□□□□□ -2
NEB-220ENST00000618972 GFRA1P56159 465 aa2.53□□□□□ -2
NEB-220ENST00000618972 DPH3Q96FX2 82 aa2.53□□□□□ -2
NEB-220ENST00000618972 ZNF142P52746 1687 aaPredicted RBP2.53□□□□□ -2
NEB-220ENST00000618972 A0A0U1RQV1 116 aa2.53□□□□□ -2
NEB-220ENST00000618972 CFC1BP0CG36 223 aa2.53□□□□□ -2
NEB-220ENST00000618972 CFC1P0CG37 223 aa2.53□□□□□ -2
NEB-220ENST00000618972 IGLL1P15814 213 aa2.53□□□□□ -2
NEB-220ENST00000618972 C19orf54Q5BKX5 351 aa2.53□□□□□ -2
NEB-220ENST00000618972 FAM214BQ7L5A3 538 aa2.53□□□□□ -2
NEB-220ENST00000618972 DLEC1Q9Y238 1755 aa2.53□□□□□ -2
NEB-220ENST00000618972 LHFPL1Q86WI0 220 aa2.53□□□□□ -2
NEB-220ENST00000618972 TM2D2Q9BX73 214 aa2.53□□□□□ -2
NEB-220ENST00000618972 EREGO14944 169 aa2.53□□□□□ -2
NEB-220ENST00000618972 DPM3Q9P2X0 92 aa2.53□□□□□ -2
NEB-220ENST00000618972 C15orf61A6NNL5 157 aa2.53□□□□□ -2
NEB-220ENST00000618972 CCL11P51671 97 aa2.53□□□□□ -2
NEB-220ENST00000618972 DLL3Q9NYJ7 618 aa2.53□□□□□ -2
NEB-220ENST00000618972 C21orf140B9A014 251 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 GLRXP35754 106 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 SIT1Q9Y3P8 196 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 SPTY2D1-AS1A0A0U1RR47 76 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 ZNF726P1Q15940 193 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 MIC13Q5XKP0 118 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 ETDBQ3ZM63 59 aa2.53□□□□□ -2.01
NEB-220ENST00000618972 H1FXQ92522 213 aaKnown RBP2.53□□□□□ -2.01
NEB-220ENST00000618972 ZNF138P52744 262 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 PNRC2Q9NPJ4 139 aaKnown RBP2.52□□□□□ -2.01
NEB-220ENST00000618972 ARID2Q68CP9 1835 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 NDUFV3P56181 108 aaKnown RBP2.52□□□□□ -2.01
NEB-220ENST00000618972 IGKV3-11P04433 115 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
NEB-220ENST00000618972 VKORC1Q9BQB6 163 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 TTC28Q96AY4 2481 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 TAX1BP3O14907 124 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 KLK10O43240 276 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 CFIP05156 583 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 UBE2BP63146 152 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 WFDC3Q8IUB2 231 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 SMIM26A0A096LP01 95 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 TDGF1P13385 188 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 XIRP1Q702N8 1843 aaKnown RBP2.52□□□□□ -2.01
NEB-220ENST00000618972 LENEPQ9Y5L5 61 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 SLC25A53Q5H9E4 307 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 ZNF474Q6S9Z5 364 aaPredicted RBP2.52□□□□□ -2.01
NEB-220ENST00000618972 CENPVL3A0A0U1RRI6 287 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 PSG7Q13046 419 aa2.52□□□□□ -2.01
NEB-220ENST00000618972 NPIPB5A8MRT5 1133 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms