RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 A0A1W2PNU3 283 aaPredicted RBP10.6□□□□□ -0.71
MSH6-214ENST00000616033 SRRM5B3KS81 715 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 K7ERJ3 54 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 SCGB2A1O75556 95 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 OR10X1Q8NGY0 326 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 SCRT2Q9NQ03 307 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 MALRD1Q5VYJ5 2156 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 DLL1O00548 723 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 CFHR2P36980 270 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 HIST1H1AQ02539 215 aaPredicted RBP10.6□□□□□ -0.71
MSH6-214ENST00000616033 C9orf106Q8NAJ2 232 aa10.6□□□□□ -0.71
MSH6-214ENST00000616033 NEU4Q8WWR8 484 aaPredicted RBP10.6□□□□□ -0.71
MSH6-214ENST00000616033 IGHV1-18A0A0C4DH31 117 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 FAM90A9PA6NNJ1 464 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 CD5LO43866 347 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 GCSHP23434 173 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 CACNG7P62955 275 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 SRSF6Q13247 344 aaKnown RBP10.59□□□□□ -0.71
MSH6-214ENST00000616033 KIR3DS1Q14943 382 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 OR1L8Q8NGR8 309 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 Q9H3A6 140 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 JKAMPQ9P055 326 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 RABAC1Q9UI14 185 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 FCER1GP30273 86 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 IFI27P40305 119 aaPredicted RBP10.59□□□□□ -0.71
MSH6-214ENST00000616033 KLF5Q13887 457 aaPredicted RBP10.59□□□□□ -0.71
MSH6-214ENST00000616033 AMTNQ6UX39 209 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 Q6ZT83 130 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 HSPB8Q9UJY1 196 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 SMKR1H3BMG3 65 aa10.59□□□□□ -0.71
MSH6-214ENST00000616033 RBP4P02753 201 aa10.58□□□□□ -0.72
MSH6-214ENST00000616033 ADAMTSL5Q6ZMM2 481 aa10.58□□□□□ -0.72
MSH6-214ENST00000616033 RBPMS2Q6ZRY4 209 aaKnown RBP10.58□□□□□ -0.72
MSH6-214ENST00000616033 ZZEF1O43149 2961 aa10.58□□□□□ -0.72
MSH6-214ENST00000616033 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
MSH6-214ENST00000616033 CDX4O14627 284 aaPredicted RBP10.58□□□□□ -0.72
MSH6-214ENST00000616033 ZNF48Q96MX3 618 aaPredicted RBP10.58□□□□□ -0.72
MSH6-214ENST00000616033 C2orf83Q53S99 150 aa10.58□□□□□ -0.72
MSH6-214ENST00000616033 MRPL32Q9BYC8 188 aaKnown RBP10.58□□□□□ -0.72
MSH6-214ENST00000616033 MUC6Q6W4X9 2439 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 APC2O95996 2303 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 F2RL2O00254 374 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 OR2J3O76001 311 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 PCP2Q8IVA1 136 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 WIPF2Q8TF74 440 aaPredicted RBP10.57□□□□□ -0.72
MSH6-214ENST00000616033 RITA1Q96K30 269 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 CD59P13987 128 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 WFDC2Q14508 124 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 PSG3Q16557 428 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 TIMM23BQ5SRD1 257 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 DEFB124Q8NES8 71 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 ARPC1AQ92747 370 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 C17orf77Q96MU5 243 aa10.57□□□□□ -0.72
MSH6-214ENST00000616033 TCRBV4S1A1TA0A5B7 111 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 KIR2DL2P43627 348 aaPredicted RBP10.56□□□□□ -0.72
MSH6-214ENST00000616033 INSL3P51460 131 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 FAM222BQ8WU58 562 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 IGFBPL1Q8WX77 278 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 A0A1B0GXF2 115 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 TNFAIP6P98066 277 aaPredicted RBP10.56□□□□□ -0.72
MSH6-214ENST00000616033 ADTRPQ96IZ2 230 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 SVEP1Q4LDE5 3571 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 CEP295Q9C0D2 2601 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 C2orf91Q6ZV80 131 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 FAM231DQ6ZW35 169 aa10.56□□□□□ -0.72
MSH6-214ENST00000616033 RPUSD1Q9UJJ7 312 aaKnown RBP10.56□□□□□ -0.72
MSH6-214ENST00000616033 M0R3E3 92 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 IGKV3-15P01624 115 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 TCRAP04437 139 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 CSN1S1P47710 185 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 HERV-K104P63124 156 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 CHCHD1Q96BP2 118 aaKnown RBP10.55□□□□□ -0.72
MSH6-214ENST00000616033 C1RLQ9NZP8 487 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 IGHV3OR16-8A0A075B7F1 116 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 TMEM213A2RRL7 107 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 FABP2P12104 132 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 PET117Q6UWS5 81 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 C3orf56Q8N813 242 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 B5MCH6 92 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 FAM162BQ5T6X4 162 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
MSH6-214ENST00000616033 ARHGAP32A7KAX9 2087 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 D6R8Y8 96 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 COX8AP10176 69 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 CNTFRP26992 372 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 SUB1P53999 127 aaKnown RBP eCLIP10.54□□□□□ -0.72
MSH6-214ENST00000616033 FAM169BQ8N8A8 192 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 CCL17Q92583 94 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 FCGR2BP31994 310 aaPredicted RBP10.54□□□□□ -0.72
MSH6-214ENST00000616033 AMN1Q8IY45 258 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 IGKV1D-37A0A075B6S9 117 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 A1L4Q6 167 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 A6NDN8 102 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 TGFAP01135 160 aa10.54□□□□□ -0.72
MSH6-214ENST00000616033 TNFRSF1AP19438 455 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms