RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 FOXL1Q12952 345 aa7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 CYB5R2Q6BCY4 276 aa7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 FAM159AQ6UWV7 190 aa7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 NRGNQ92686 78 aa7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 NDUFB8O95169 186 aa7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 ITLN2Q8WWU7 325 aaPredicted RBP7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 OR10J3Q5JRS4 329 aa7.15□□□□□ -1.26
PDLIM5-222ENST00000615540 A6NNC1 897 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 SMKR1H3BMG3 65 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 RAB9AP51151 201 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 PSG3Q16557 428 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 PYY3Q5JQD4 70 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 LYZL1Q6UWQ5 148 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 LYPD6BQ8NI32 183 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 C22orf46C9J442 243 aa7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 C1orf229Q6ZS94 237 aaPredicted RBP7.15□□□□□ -1.27
PDLIM5-222ENST00000615540 ZNF324O75467 553 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 LCNL1Q6ZST4 164 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 OR4X2Q8NGF9 303 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 NDUFA3O95167 84 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 ODF3L1Q8IXM7 274 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 RTTNQ86VV8 2226 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 COL5A1P20908 1838 aaPredicted RBP7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 FAM181BA6NEQ2 426 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 ADORA2A-AS1P86434 159 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 COL5A1-AS1Q5SY13 56 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 MINOS1Q5TGZ0 78 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 Q86TA4 180 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 ARL6IP6Q8N6S5 226 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 Q8NA96 180 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 C17orf77Q96MU5 243 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 FOXC2Q99958 501 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 YAE1D1Q9NRH1 226 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 MINOS1-NBL1R4GNA1 71 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 M0R3E3 92 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 IGHV2-70P01814 119 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 IGF2-ASQ6U949 168 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 ICE1Q9Y2F5 2266 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 CPAMD8Q8IZJ3 1885 aa7.14□□□□□ -1.27
PDLIM5-222ENST00000615540 MORN5Q5VZ52 161 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 IGHV2-70DA0A0C4DH43 119 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 D6R8Y8 96 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 PRTN3P24158 256 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 SLC25A34Q6PIV7 304 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 H3BVH4 76 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 TECTAO75443 2155 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 SRSF9Q13242 221 aaKnown RBP eCLIP7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 SHANK2-AS3Q9BTD1 123 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 A0A0G2JLM5 398 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 E7EUB6 86 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 H7C2G1 150 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 LCN12Q6JVE5 192 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 ZNF414Q96IQ9 312 aa7.13□□□□□ -1.27
PDLIM5-222ENST00000615540 CD7P09564 240 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 LINC00614P0C842 121 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 CFHR2P36980 270 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 GUSBP1Q15486 140 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 PSMG4Q5JS54 123 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 CDPF1Q6NVV7 123 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 ORMDL3Q8N138 153 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 C11orf1Q9H5F2 150 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 FNDC4Q9H6D8 234 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 RNF223E7ERA6 249 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 GCSHP23434 173 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 HERVK_113P61574 105 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 DUX3Q96PT4 197 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 RNF5Q99942 180 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 FABP5P3A8MUU1 101 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 F2Z2F3 143 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 JOSD1Q15040 202 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 SOX21Q9Y651 276 aaPredicted RBP7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 DOCK7Q96N67 2140 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 FNDC10F2Z333 226 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 VWC2Q2TAL6 325 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 DGAT2L7PQ6IED9 249 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 RAX2Q96IS3 184 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 ZMAT5Q9UDW3 170 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 V9GYV3 84 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 IGHV3-73A0A0B4J1V6 119 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 IL17RELQ6ZVW7 336 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 OR1N2Q8NGR9 330 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 HEATR1Q9H583 2144 aaKnown RBP7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 NCKAP5O14513 1909 aa7.12□□□□□ -1.27
PDLIM5-222ENST00000615540 PFN1P07737 140 aaKnown RBP7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 DDB2Q92466 427 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 FXYD5Q96DB9 178 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 SLC50A1Q9BRV3 221 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 NPFFR1Q9GZQ6 430 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 NCOR1P1Q9H4R4 102 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 A6NDN8 102 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 NSUN5P1Q3KNT7 163 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 IGKV3OR2-268A0A0C4DH90 116 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 HIST2H2BCQ6DN03 193 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 LINC00311Q8N616 119 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 MYO7BQ6PIF6 2116 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 PSMB2P49721 201 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 LDLRAD2Q5SZI1 272 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 TRAV8-6A0A0B4J262 113 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 TMEM213A2RRL7 107 aa7.11□□□□□ -1.27
PDLIM5-222ENST00000615540 IGLV2-23P01705 113 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms