RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 FUT9Q9Y231 359 aa8.72□□□□□ -1.01
LINC00539-204ENST00000608957 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
LINC00539-204ENST00000608957 RAB19A4D1S5 217 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 HYPMO75409 117 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 OR2C1O95371 312 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 CTSGP08311 255 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 FRMD6-AS1P0C7T7 363 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 NHLRC4P0CG21 123 aaPredicted RBP8.71□□□□□ -1.02
LINC00539-204ENST00000608957 STAG3L2P0CL84 134 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 STAG3L3P0CL85 134 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 ORM2P19652 201 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 ADMP35318 185 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 FGF8P55075 233 aaPredicted RBP8.71□□□□□ -1.02
LINC00539-204ENST00000608957 SPATA31B1PQ5VZV4 182 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 ZNF600Q6ZNG1 722 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 MIR17HGQ75NE6 70 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 Q8WTZ3 238 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 RNF125Q96EQ8 232 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 CHRDL1Q9BU40 450 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 DNAJC4Q9NNZ3 241 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 U3KQK5 164 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 TENM3Q9P273 2699 aa8.71□□□□□ -1.02
LINC00539-204ENST00000608957 DNAH7Q8WXX0 4024 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 IL4P05112 153 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 CLEC3BP05452 202 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 TAS2R45P59539 299 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 RELQ04864 619 aaPredicted RBP8.7□□□□□ -1.02
LINC00539-204ENST00000608957 FAM209BQ5JX69 171 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 PATE2Q6UY27 113 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 EIF4E3Q8N5X7 224 aaKnown RBP8.7□□□□□ -1.02
LINC00539-204ENST00000608957 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 WWC2-AS2Q96NR7 200 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 CITED4Q96RK1 184 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 PBDC1Q9BVG4 233 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 TECRQ9NZ01 308 aaKnown RBP8.7□□□□□ -1.02
LINC00539-204ENST00000608957 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
LINC00539-204ENST00000608957 C2orf70A6NJV1 201 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 GGCTO75223 188 aaKnown RBP8.69□□□□□ -1.02
LINC00539-204ENST00000608957 CXorf1O96002 111 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 IFNA1P01562 189 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 C8orf88P0DMB2 117 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 IGHV4-30-4P0DP06 118 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 ARL3P36405 182 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 CCL20P78556 96 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 KHDC3LQ587J8 217 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 TOR2AQ5JU69 321 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 UQCC3Q6UW78 93 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 LINC00305Q7Z4B0 112 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 IQCF2Q8IXL9 164 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 ZNF414Q96IQ9 312 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 UHRF2Q96PU4 802 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 C19orf73Q9NVV2 129 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
LINC00539-204ENST00000608957 SELENOKQ9Y6D0 94 aa8.69□□□□□ -1.02
LINC00539-204ENST00000608957 ZNF785A8K8V0 405 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 LGALS9O00182 355 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 PSMB3P49720 205 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 PPT1P50897 306 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 USF2Q15853 346 aaPredicted RBP8.68□□□□□ -1.02
LINC00539-204ENST00000608957 GUK1Q16774 197 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 CD300EQ496F6 205 aaPredicted RBP8.68□□□□□ -1.02
LINC00539-204ENST00000608957 MORN5Q5VZ52 161 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 PQLC2Q6ZP29 291 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 S100A7AQ86SG5 101 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 GPHB5Q86YW7 130 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 FAM167A-AS1Q96KT0 104 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 SLC25A2Q9BXI2 301 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 SLC25A39Q9BZJ4 359 aaPredicted RBP8.68□□□□□ -1.02
LINC00539-204ENST00000608957 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 MANBALQ9NQG1 85 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 MRPL27Q9P0M9 148 aaKnown RBP8.68□□□□□ -1.02
LINC00539-204ENST00000608957 GNG13Q9P2W3 67 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 PEMTQ9UBM1 199 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 STAB2Q8WWQ8 2551 aa8.68□□□□□ -1.02
LINC00539-204ENST00000608957 TRAV5A0A0B4J249 113 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 LOC102723971A0A1B0GUV8 181 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 TMEM213A2RRL7 107 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 A8MZ25 164 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 H3BRN7 92 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 OR7C2O60412 319 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 BCL2P10415 239 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 GCHFRP30047 84 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 PMS2P11Q13670 270 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 DEFB114Q30KQ6 69 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 TOMM20LQ6UXN7 152 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 UNQ9165/PRO28630Q6UXU0 137 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 SHANK2-AS3Q9BTD1 123 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 SCRT1Q9BWW7 348 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 TMPRSS5Q9H3S3 457 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 TMEM231Q9H6L2 316 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 RABAC1Q9UI14 185 aa8.67□□□□□ -1.02
LINC00539-204ENST00000608957 IGHV3-35A0A0C4DH35 117 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 RBFOX3A6NFN3 312 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 FOLR2P14207 255 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 S100A7P31151 101 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 TAGLN2P37802 199 aaKnown RBP8.66□□□□□ -1.02
LINC00539-204ENST00000608957 SRSF3P84103 164 aaKnown RBP8.66□□□□□ -1.02
LINC00539-204ENST00000608957 PEA15Q15121 130 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 HAGHQ16775 308 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms