RNA–Protein interactions for RNA: ENST00000601524.5

LINC02028-214, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 616 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-214	ENST00000601524	CXCL3	P19876	107 aa		11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	NKX2-1	P43699	371 aa	Predicted RBP	11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	NPBWR1	P48145	328 aa		11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	PAX9	P55771	341 aa		11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	ZNF114	Q8NC26	417 aa		11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	MGAT4C	Q9UBM8	478 aa		11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	LINC00588	Q9Y4M8	146 aa		11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	YTHDF2	Q9Y5A9	579 aa	Known RBP	11.77	□□□□□ -0.53
LINC02028-214	ENST00000601524	FAM90A26	D6RGX4	464 aa		11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	SSSCA1	O60232	199 aa		11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	SNCA	P37840	140 aa		11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	EIF2B2	P49770	351 aa	Known RBP	11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	FXYD7	P58549	80 aa		11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	FCN2	Q15485	313 aa		11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	OR11H7	Q8NGC8	314 aa		11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	NARS2	Q96I59	477 aa	Known RBP	11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	FNDC4	Q9H6D8	234 aa	Predicted RBP	11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	MRPL36	Q9P0J6	103 aa	Known RBP	11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524	RCL1	Q9Y2P8	373 aa	Known RBP	11.76	□□□□□ -0.53
LINC02028-214	ENST00000601524		H3BP45	60 aa		11.75	□□□□□ -0.53
LINC02028-214	ENST00000601524		K7EPK0	472 aa		11.75	□□□□□ -0.53
LINC02028-214	ENST00000601524	CRYBB3	P26998	211 aa		11.75	□□□□□ -0.53
LINC02028-214	ENST00000601524	RAB32	Q13637	225 aa		11.75	□□□□□ -0.53
LINC02028-214	ENST00000601524	SLC24A4	Q8NFF2	622 aa		11.75	□□□□□ -0.53
LINC02028-214	ENST00000601524	LSM5	Q9Y4Y9	91 aa	Known RBP	11.75	□□□□□ -0.53
LINC02028-214	ENST00000601524	LOC102723971	A0A1B0GUV8	181 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	CCNK	O75909	580 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	IGKV3-20	P01619	116 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	SMR3B	P02814	79 aa	Predicted RBP	11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	FUS	P35637	526 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	HTR2B	P41595	481 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	SNRPD3	P62318	126 aa	Known RBP	11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	C2orf83	Q53S99	150 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	TTC32	Q5I0X7	151 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	KRTAP1-5	Q9BYS1	174 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	C11orf1	Q9H5F2	150 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524		Q9H8V8	135 aa		11.74	□□□□□ -0.53
LINC02028-214	ENST00000601524	MED6	O75586	246 aa		11.73	□□□□□ -0.53
LINC02028-214	ENST00000601524	HBE1	P02100	147 aa		11.73	□□□□□ -0.53
LINC02028-214	ENST00000601524	SPANXN5	Q5MJ07	72 aa		11.73	□□□□□ -0.53
LINC02028-214	ENST00000601524	MED28	Q9H204	178 aa		11.73	□□□□□ -0.53
LINC02028-214	ENST00000601524	PGPEP1	Q9NXJ5	209 aa		11.73	□□□□□ -0.53
LINC02028-214	ENST00000601524	PAIP2B	Q9ULR5	123 aa	Known RBP	11.73	□□□□□ -0.53
LINC02028-214	ENST00000601524	FAM229A	H3BQW9	127 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	HLA-DRB4	P13762	266 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	SUB1	P53999	127 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	S100A10	P60903	97 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	LRRC37A5P	Q49AS3	106 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	SSX7	Q7RTT5	188 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	SMIM8	Q96KF7	97 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	C17orf77	Q96MU5	243 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	PSENEN	Q9NZ42	101 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	CACFD1	Q9UGQ2	172 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	GOLT1B	Q9Y3E0	138 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524		U3KQ87	197 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524	HLA-DRB4	X5D2U9	266 aa		11.72	□□□□□ -0.53
LINC02028-214	ENST00000601524		F5H768	121 aa		11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524		H0YIZ8	118 aa		11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	AP2S1	P53680	142 aa	Predicted RBP	11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	RRAS2	P62070	204 aa	Predicted RBP	11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	CLINT1	Q14677	625 aa		11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	CHAC2	Q8WUX2	184 aa		11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	NMES1	Q9C002	83 aa		11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	OR5AC2	Q9NZP5	309 aa		11.71	□□□□□ -0.53
LINC02028-214	ENST00000601524	HMCN2	Q8NDA2	5059 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	PMS2P5	A8MQ11	134 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	OPRK1	P41145	380 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	ARL16	Q0P5N6	197 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	USF2	Q15853	346 aa	Predicted RBP	11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	RRN3P1	Q2M238	152 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524		Q6ZNX1	250 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524		Q6ZSN1	163 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	ZNF503	Q96F45	646 aa		11.7	□□□□□ -0.54
LINC02028-214	ENST00000601524	FAM24A	A6NFZ4	105 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	PRSS46	E5RG02	174 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	METTL15P1	P0C7V9	234 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524		Q5BKY6	102 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	SERTAD4-AS1	Q5TG53	156 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	SYT8	Q8NBV8	401 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	PPP1R1C	Q8WVI7	109 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	CIB3	Q96Q77	187 aa	Predicted RBP	11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524		Q9H3A6	140 aa		11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	SEPSECS	Q9HD40	501 aa	Known RBP	11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	STRAP	Q9Y3F4	350 aa	Known RBP	11.69	□□□□□ -0.54
LINC02028-214	ENST00000601524	GDF5OS	Q5U4N7	250 aa		11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524	PRSS54	Q6PEW0	395 aa		11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524	C16orf54	Q6UWD8	224 aa		11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524	TMEM14EP	Q6UXP3	125 aa		11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524	C1orf158	Q8N1D5	194 aa		11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524	RNASEH2C	Q8TDP1	164 aa	Known RBP	11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524	GLMP	Q8WWB7	406 aa		11.68	□□□□□ -0.54
LINC02028-214	ENST00000601524		A0A1B0GVG6	124 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	IGSF23	A1L1A6	192 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524		L7N2F9	121 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	CORT	O00230	105 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	EREG	O14944	169 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	DEFB130B	P0DP73	79 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	DEFB130A	P0DP74	79 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	DEFB1	P60022	68 aa		11.67	□□□□□ -0.54
LINC02028-214	ENST00000601524	KRTAP10-1	P60331	282 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms