RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 C1orf229Q6ZS94 237 aaPredicted RBP12.46□□□□□ -0.42
PDE4C-211ENST00000597360 OR5AN1Q8NGI8 311 aa12.46□□□□□ -0.42
PDE4C-211ENST00000597360 CHAC1Q9BUX1 264 aa12.46□□□□□ -0.42
PDE4C-211ENST00000597360 INSIG2Q9Y5U4 225 aa12.46□□□□□ -0.42
PDE4C-211ENST00000597360 UPK2O00526 184 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 RNASE2P10153 161 aaKnown RBP12.45□□□□□ -0.42
PDE4C-211ENST00000597360 CFAP161Q6P656 301 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 DUSP23Q9BVJ7 150 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 TECTAO75443 2155 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 SOX21Q9Y651 276 aaPredicted RBP12.45□□□□□ -0.42
PDE4C-211ENST00000597360 LRP4O75096 1905 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 TMEM213A2RRL7 107 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 FAM90A9PA6NNJ1 464 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 SRRM4A7MD48 611 aaKnown RBP12.45□□□□□ -0.42
PDE4C-211ENST00000597360 C15orf65H3BRN8 121 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 TCRAP04437 139 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 SYT8Q8NBV8 401 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 FAM222BQ8WU58 562 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 FXYD5Q96DB9 178 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 FOXC2Q99958 501 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 C20orf78Q9BR46 151 aa12.45□□□□□ -0.42
PDE4C-211ENST00000597360 MED13Q9UHV7 2174 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 AKAP6Q13023 2319 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 HBDP02042 147 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 TWIST1Q15672 202 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 BOD1L2Q8IYS8 172 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 PCNX1Q96RV3 2341 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 ZNF766Q5HY98 468 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 PATE2Q6UY27 113 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 RPRMLQ8N4K4 120 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 TTTY12Q9BZ98 90 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 APOBEC3AP31941 199 aaPredicted RBP12.44□□□□□ -0.42
PDE4C-211ENST00000597360 MBNL2Q5VZF2 373 aaKnown RBP12.44□□□□□ -0.42
PDE4C-211ENST00000597360 ITLN1Q8WWA0 313 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 MRAP2Q96G30 205 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 SIGLEC8Q9NYZ4 499 aa12.44□□□□□ -0.42
PDE4C-211ENST00000597360 MED13LQ71F56 2210 aa12.43□□□□□ -0.42
PDE4C-211ENST00000597360 Q0VFX4 171 aa12.43□□□□□ -0.42
PDE4C-211ENST00000597360 Q71RC1 249 aaPredicted RBP12.43□□□□□ -0.42
PDE4C-211ENST00000597360 FNDC10F2Z333 226 aa12.43□□□□□ -0.42
PDE4C-211ENST00000597360 KIR2DL2P43627 348 aaPredicted RBP12.43□□□□□ -0.42
PDE4C-211ENST00000597360 FMC1Q96HJ9 113 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 IGKV3D-15A0A087WSY6 115 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 NPIPB6E9PJ23 425 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 EVI2AP22794 236 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 ARL3P36405 182 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 OR10X1Q8NGY0 326 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 CCL13Q99616 98 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 TCRBV4S1A1TA0A5B7 111 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 IL11RAQ14626 422 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 ZC2HC1BQ5TFG8 222 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 ORMDL3Q8N138 153 aa12.42□□□□□ -0.42
PDE4C-211ENST00000597360 CNIH1O95406 144 aa12.41□□□□□ -0.42
PDE4C-211ENST00000597360 DUX4L9Q6RFH8 374 aaPredicted RBP12.41□□□□□ -0.42
PDE4C-211ENST00000597360 ANAPC13Q9BS18 74 aa12.41□□□□□ -0.42
PDE4C-211ENST00000597360 IQCF6A8MYZ5 107 aa12.41□□□□□ -0.42
PDE4C-211ENST00000597360 EP300Q09472 2414 aaPredicted RBP12.41□□□□□ -0.42
PDE4C-211ENST00000597360 AGRNO00468 2067 aa12.41□□□□□ -0.42
PDE4C-211ENST00000597360 IGKV1D-17A0A075B6S4 117 aa12.41□□□□□ -0.42
PDE4C-211ENST00000597360 C2orf83Q53S99 150 aa12.41□□□□□ -0.42
PDE4C-211ENST00000597360 MRPL36Q9P0J6 103 aaKnown RBP12.41□□□□□ -0.42
PDE4C-211ENST00000597360 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
PDE4C-211ENST00000597360 FGF6P10767 208 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 C11orf53Q8IXP5 236 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 CEP192Q8TEP8 1941 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 PTPRZ1P23471 2315 aaPredicted RBP12.4□□□□□ -0.42
PDE4C-211ENST00000597360 CNOT1A5YKK6 2376 aaKnown RBP12.4□□□□□ -0.42
PDE4C-211ENST00000597360 SCGB1A1P11684 91 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 LEPP41159 167 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 KLK15Q9H2R5 256 aa12.4□□□□□ -0.42
PDE4C-211ENST00000597360 PSMB2P49721 201 aa12.4□□□□□ -0.43
PDE4C-211ENST00000597360 LYZL1Q6UWQ5 148 aa12.4□□□□□ -0.43
PDE4C-211ENST00000597360 MRPL20Q9BYC9 149 aaKnown RBP12.4□□□□□ -0.43
PDE4C-211ENST00000597360 TMEM189A5PLL7 270 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 TNFRSF1AP19438 455 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 MEOX1P50221 254 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 SLC25A48Q6ZT89 311 aaKnown RBP12.39□□□□□ -0.43
PDE4C-211ENST00000597360 TTC9CQ8N5M4 171 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 SPANXB1Q9NS25 103 aaPredicted RBP12.39□□□□□ -0.43
PDE4C-211ENST00000597360 E7EUB6 86 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 PLGLAQ15195 96 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 CACNG8Q8WXS5 425 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 RAB9BQ9NP90 201 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 S4R3C0 116 aa12.39□□□□□ -0.43
PDE4C-211ENST00000597360 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 B5MCH6 92 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 M0R3E3 92 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 SCGB2A1O75556 95 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 NDUFA3O95167 84 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 PRB3Q04118 309 aaPredicted RBP12.38□□□□□ -0.43
PDE4C-211ENST00000597360 LGALS9BQ3B8N2 356 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 TMEM178AQ8NBL3 297 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 MRPL16Q9NX20 251 aaKnown RBP12.38□□□□□ -0.43
PDE4C-211ENST00000597360 HIGD1AQ9Y241 93 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 SS18L1O75177 396 aaPredicted RBP12.38□□□□□ -0.43
PDE4C-211ENST00000597360 LPAL2Q16609 132 aa12.38□□□□□ -0.43
PDE4C-211ENST00000597360 F8W1H4 67 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms