RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 TSPAN13O95857 204 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 RPL8P62917 257 aaKnown RBP12.34□□□□□ -0.43
PNKP-204ENST00000594661 FOXE3Q13461 319 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 TMEM155Q4W5P6 130 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 FA2HQ7L5A8 372 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 CHCHD1Q96BP2 118 aaKnown RBP12.34□□□□□ -0.43
PNKP-204ENST00000594661 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
PNKP-204ENST00000594661 RPL24P83731 157 aaKnown RBP12.33□□□□□ -0.44
PNKP-204ENST00000594661 TIGITQ495A1 244 aa12.33□□□□□ -0.44
PNKP-204ENST00000594661 IBA57Q5T440 356 aaKnown RBP12.33□□□□□ -0.44
PNKP-204ENST00000594661 PQLC2Q6ZP29 291 aa12.33□□□□□ -0.44
PNKP-204ENST00000594661 ABHD12Q8N2K0 398 aa12.33□□□□□ -0.44
PNKP-204ENST00000594661 IGHV1-24A0A0C4DH33 117 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 CT45A6P0DMU7 189 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 CT45A5P0DMU8 189 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 CT45A7P0DMV0 189 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 KIR3DS1Q14943 382 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 LINC00173Q6ZV60 143 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 GEMIN7Q9H840 131 aaKnown RBP12.32□□□□□ -0.44
PNKP-204ENST00000594661 K7EQM0 130 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 LEPROTL1O95214 131 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 IGLV2-8P01709 118 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 APOA2P02652 100 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 RTL8BQ17RB0 113 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 TMEM14BQ9NUH8 114 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 PGPEP1Q9NXJ5 209 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 FOXA2Q9Y261 457 aaPredicted RBP12.32□□□□□ -0.44
PNKP-204ENST00000594661 SELENOKQ9Y6D0 94 aa12.32□□□□□ -0.44
PNKP-204ENST00000594661 USP24Q9UPU5 2620 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 ZNF207O43670 478 aaKnown RBP12.31□□□□□ -0.44
PNKP-204ENST00000594661 FSTL3O95633 263 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 OR5AL1P0C617 328 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 DTX2Q86UW9 622 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 SH2D7A6NKC9 451 aaPredicted RBP12.31□□□□□ -0.44
PNKP-204ENST00000594661 IGKV1-16P04430 117 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 HSPE1P61604 102 aaKnown RBP12.31□□□□□ -0.44
PNKP-204ENST00000594661 POU2AF1Q16633 256 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 DPF1Q92782 380 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 ENY2Q9NPA8 101 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 ZNF257Q9Y2Q1 563 aa12.31□□□□□ -0.44
PNKP-204ENST00000594661 J3QR89 54 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 FGF6P10767 208 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 MYOD1P15172 320 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 LINC01545Q5VT33 79 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 BLNKQ8WV28 456 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 GGTLC1Q9BX51 225 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 HINT2Q9BX68 163 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 MAP1LC3CQ9BXW4 147 aa12.3□□□□□ -0.44
PNKP-204ENST00000594661 MRPL20Q9BYC9 149 aaKnown RBP12.3□□□□□ -0.44
PNKP-204ENST00000594661 PRSS46E5RG02 174 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 IGHV1-8P0DP01 117 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
PNKP-204ENST00000594661 FABP2P12104 132 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 IGF2BP2-AS1Q96M15 143 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 MGST2Q99735 147 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
PNKP-204ENST00000594661 OR11H12B2RN74 326 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 MFAP2P55001 183 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 DLX1P56177 255 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 DIAPH2-AS1Q14236 149 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 OR11H1Q8NG94 326 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 NEU4Q8WWR8 484 aaPredicted RBP12.29□□□□□ -0.44
PNKP-204ENST00000594661 GRAMD2BQ96HH9 432 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 UBTD1Q9HAC8 227 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 PRNDQ9UKY0 176 aa12.29□□□□□ -0.44
PNKP-204ENST00000594661 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 SRRM4A7MD48 611 aaKnown RBP12.28□□□□□ -0.44
PNKP-204ENST00000594661 LIPFP07098 398 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 IGFBP2P18065 325 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 MIC13Q5XKP0 118 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 OR10X1Q8NGY0 326 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 UPK2O00526 184 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 PRB3Q04118 309 aaPredicted RBP12.28□□□□□ -0.44
PNKP-204ENST00000594661 LINC00311Q8N616 119 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 C8orf31Q8N9H6 132 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 NHLRC2Q8NBF2 726 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 SERTAD4Q9NUC0 356 aa12.28□□□□□ -0.44
PNKP-204ENST00000594661 ADAMTSL5Q6ZMM2 481 aa12.27□□□□□ -0.45
PNKP-204ENST00000594661 FAM231DQ6ZW35 169 aa12.27□□□□□ -0.45
PNKP-204ENST00000594661 ATP5L2Q7Z4Y8 100 aa12.27□□□□□ -0.45
PNKP-204ENST00000594661 NUP35Q8NFH5 326 aa12.27□□□□□ -0.45
PNKP-204ENST00000594661 TMEM133Q9H2Q1 129 aa12.27□□□□□ -0.45
PNKP-204ENST00000594661 SPANXB1Q9NS25 103 aaPredicted RBP12.27□□□□□ -0.45
PNKP-204ENST00000594661 RABAC1Q9UI14 185 aa12.27□□□□□ -0.45
PNKP-204ENST00000594661 A0A1B0GXF2 115 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 A0A1W2PRE2 83 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 NDUFS7O75251 213 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 SAA1P0DJI8 122 aaPredicted RBP12.26□□□□□ -0.45
PNKP-204ENST00000594661 SPATA31B1PQ5VZV4 182 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 OR9G1Q8NH87 305 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 FAM168AQ92567 244 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 TIMD4Q96H15 378 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 PLEKHA3Q9HB20 300 aa12.26□□□□□ -0.45
PNKP-204ENST00000594661 MRPL16Q9NX20 251 aaKnown RBP12.26□□□□□ -0.45
PNKP-204ENST00000594661 TACC2O95359 2948 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms