RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 CT45A3Q8NHU0 189 aa12.21□□□□□ -0.46
CIRBP-228ENST00000590347 C10orf55Q5SWW7 151 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 ATP5L2Q7Z4Y8 100 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 NPIPB3Q92617 1050 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 CHAC1Q9BUX1 264 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 MRPL36Q9P0J6 103 aaKnown RBP12.2□□□□□ -0.46
CIRBP-228ENST00000590347 D6R8Y8 96 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 ZNF146Q15072 292 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 RUSC1-AS1Q66K80 236 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 C8orf86Q6ZUL3 223 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 MRPL16Q9NX20 251 aaKnown RBP12.2□□□□□ -0.46
CIRBP-228ENST00000590347 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 TCRBV4S1A1TA0A5B7 111 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 TMEM189A5PLL7 270 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 APOMO95445 188 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 IGKV1-16P04430 117 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 XGP55808 180 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 C10orf113Q5VZT2 155 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 SMIM20Q8N5G0 67 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 TMEM178AQ8NBL3 297 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 UFC1Q9Y3C8 167 aa12.2□□□□□ -0.46
CIRBP-228ENST00000590347 A0A1W2PNU3 283 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-228ENST00000590347 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 PDPNQ86YL7 162 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 ZNRF1Q8ND25 227 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 ZNF418Q8TF45 676 aaPredicted RBP12.19□□□□□ -0.46
CIRBP-228ENST00000590347 TMEM213A2RRL7 107 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 MPV17P39210 176 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 GAGE13Q4V321 117 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 ATP1A1-AS1Q5TC04 95 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 FER1L6-AS2Q96M78 137 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 GPR82Q96P67 336 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 SIGLEC8Q9NYZ4 499 aa12.19□□□□□ -0.46
CIRBP-228ENST00000590347 MAGEA5P43359 124 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 OR4X2Q8NGF9 303 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 E7EUB6 86 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 AMN1Q8IY45 258 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 OR9G4Q8NGQ1 327 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 FXYD5Q96DB9 178 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 NDFIP1Q9BT67 221 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 PTPRBP23467 1997 aa12.18□□□□□ -0.46
CIRBP-228ENST00000590347 SRRM4A7MD48 611 aaKnown RBP12.17□□□□□ -0.46
CIRBP-228ENST00000590347 IGLL5B9A064 214 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 TCTEX1D4Q5JR98 221 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 EXOC3-AS1Q8N2X6 119 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 C3orf56Q8N813 242 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 WNK2Q9Y3S1 2297 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 PEAR1Q5VY43 1037 aaPredicted RBP12.17□□□□□ -0.46
CIRBP-228ENST00000590347 RBMXL3Q8N7X1 1067 aaKnown RBP12.17□□□□□ -0.46
CIRBP-228ENST00000590347 RALYQ9UKM9 306 aaKnown RBP12.17□□□□□ -0.46
CIRBP-228ENST00000590347 ATMQ13315 3056 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 WISP2O76076 250 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 C6orf15Q6UXA7 325 aaPredicted RBP12.17□□□□□ -0.46
CIRBP-228ENST00000590347 GOLT1AQ6ZVE7 132 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 ANAPC13Q9BS18 74 aa12.17□□□□□ -0.46
CIRBP-228ENST00000590347 TRBV20-1A0A075B6N2 111 aa12.16□□□□□ -0.46
CIRBP-228ENST00000590347 FOXI2Q6ZQN5 318 aa12.16□□□□□ -0.46
CIRBP-228ENST00000590347 CDIP1Q9H305 208 aa12.16□□□□□ -0.46
CIRBP-228ENST00000590347 PRSS29PA6NIE9 313 aa12.16□□□□□ -0.46
CIRBP-228ENST00000590347 ZNF766Q5HY98 468 aa12.16□□□□□ -0.46
CIRBP-228ENST00000590347 IFI27L1Q96BM0 104 aa12.16□□□□□ -0.46
CIRBP-228ENST00000590347 CD177Q8N6Q3 437 aa12.15□□□□□ -0.46
CIRBP-228ENST00000590347 PHLDA1Q8WV24 401 aaPredicted RBP12.15□□□□□ -0.46
CIRBP-228ENST00000590347 IFI27L2Q9H2X8 130 aa12.15□□□□□ -0.46
CIRBP-228ENST00000590347 CACNA1BQ00975 2339 aa12.15□□□□□ -0.46
CIRBP-228ENST00000590347 SAA2P0DJI9 122 aaPredicted RBP12.15□□□□□ -0.46
CIRBP-228ENST00000590347 NFE4Q86UQ8 179 aa12.15□□□□□ -0.46
CIRBP-228ENST00000590347 GCSAMQ8N6F7 178 aa12.15□□□□□ -0.46
CIRBP-228ENST00000590347 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.46
CIRBP-228ENST00000590347 OTOGLQ3ZCN5 2332 aa12.15□□□□□ -0.46
CIRBP-228ENST00000590347 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.47
CIRBP-228ENST00000590347 C15orf65H3BRN8 121 aa12.15□□□□□ -0.47
CIRBP-228ENST00000590347 GAS8-AS1O95177 125 aa12.15□□□□□ -0.47
CIRBP-228ENST00000590347 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 CDX4O14627 284 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-228ENST00000590347 PRSS1P07477 247 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 DUX4L9Q6RFH8 374 aaPredicted RBP12.14□□□□□ -0.47
CIRBP-228ENST00000590347 TMEM14BQ9NUH8 114 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 PKDREJQ9NTG1 2253 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 PRELID3AQ96N28 172 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 KIR2DL4Q99706 377 aa12.14□□□□□ -0.47
CIRBP-228ENST00000590347 F8W1H4 67 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
CIRBP-228ENST00000590347 Q8IYB0 196 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 WDR31Q8NA23 367 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 MAPKAPK5-AS1Q8N8E1 139 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 PRSS22Q9GZN4 317 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 TMEM160Q9NX00 188 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 TRGV8A0A0C4DH27 118 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 NDUFS7O75251 213 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 TNFRSF1AP19438 455 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 CYB561P49447 251 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 MLST8Q9BVC4 326 aa12.13□□□□□ -0.47
CIRBP-228ENST00000590347 ZZEF1O43149 2961 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 C19orf71A6NCJ1 209 aa12.12□□□□□ -0.47
CIRBP-228ENST00000590347 RNASE2P10153 161 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms