RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 FAM213BQ8TBF2 198 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 MBD3L1Q8WWY6 194 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 DLX4Q92988 240 aaPredicted RBP7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 RAB24Q969Q5 203 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 ZNF414Q96IQ9 312 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 DOK5Q9P104 306 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 ZMAT5Q9UDW3 170 aaKnown RBP7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 ARL2-SNX15V9GYD0 113 aa7.89□□□□□ -1.15
CLPTM1-207ENST00000587537 TRAV2A0A0B4J234 112 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 ZNF705EA8MWA4 302 aaPredicted RBP7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 RGS13O14921 159 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 ZNF253O75346 499 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 PSMB3P49720 205 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 PMS2P11Q13670 270 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 PDE6HQ13956 83 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 FAM122CQ6P4D5 195 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 C16orf54Q6UWD8 224 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 WFDC9Q8NEX5 89 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 SPATA3Q8NHX4 192 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 RHPN1-AS1Q9BWJ2 59 aa7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 SEPSECSQ9HD40 501 aaKnown RBP7.88□□□□□ -1.15
CLPTM1-207ENST00000587537 A0A087X0K7 114 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 MAP1LC3B2A6NCE7 125 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 CHEK1O14757 476 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 OR7C2O60412 319 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 CSN3P07498 182 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 FOLR2P14207 255 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 ATF4P18848 351 aaPredicted RBP7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 PAFAH1B2P68402 229 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 TM4SF20Q53R12 229 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 GCSAMLQ5JQS6 135 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 SIGLEC15Q6ZMC9 328 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 DYNLRB2Q8TF09 96 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 GLMPQ8WWB7 406 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 UHRF2Q96PU4 802 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 TXNDC17Q9BRA2 123 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 MAP1LC3BQ9GZQ8 125 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 OR51M1Q9H341 326 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 HRH4Q9H3N8 390 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 SLC25A22Q9H936 323 aa7.87□□□□□ -1.15
CLPTM1-207ENST00000587537 IFNA1P01562 189 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 HIST1H1EP10412 219 aaKnown RBP7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 GP9P14770 177 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 CD33P20138 364 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 C9orf66Q5T8R8 295 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 LCN15Q6UWW0 184 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 IL34Q6ZMJ4 242 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 MIR17HGQ75NE6 70 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 ARL6IP6Q8N6S5 226 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 LYPD6BQ8NI32 183 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 SUN5Q8TC36 379 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 SFT2D1Q8WV19 159 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 TCEAL7Q9BRU2 100 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 SLC50A1Q9BRV3 221 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 PAXXQ9BUH6 204 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 SCRT1Q9BWW7 348 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 WNK1Q9H4A3 2382 aa7.86□□□□□ -1.15
CLPTM1-207ENST00000587537 WIPF1O43516 503 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 NDUFS6O75380 124 aaKnown RBP7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 ARL14EPLP0DKL9 152 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 CMC4P56277 68 aaPredicted RBP7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 UBE2L3P68036 154 aaKnown RBP7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 PSG9Q00887 426 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 CLLU1Q5K131 121 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 FAM74A1Q5RGS3 127 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 LCN12Q6JVE5 192 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 RBPMS2Q6ZRY4 209 aaKnown RBP7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 FAM167A-AS1Q96KT0 104 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 DUX3Q96PT4 197 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 SPAG8Q99932 426 aaPredicted RBP7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 SLC25A2Q9BXI2 301 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 NRN1Q9NPD7 142 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 MANBALQ9NQG1 85 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 RFNGQ9Y644 331 aa7.85□□□□□ -1.15
CLPTM1-207ENST00000587537 IGHV3OR16-8A0A075B7F1 116 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 A0A1W2PRE2 83 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 TSPAN4O14817 238 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 ZNF207O43670 478 aaKnown RBP7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 SAP30O75446 220 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 NBEAP1P0C6P0 100 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 IGLC2P0DOY2 106 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 GCHFRP30047 84 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 ID1P41134 155 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 FHITP49789 147 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 IFITM2Q01629 132 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 ZNF726P1Q15940 193 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 TCF24Q7RTU0 167 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 SMDT1Q9H4I9 107 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 MLXQ9UH92 298 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 PRELID1Q9Y255 219 aa7.84□□□□□ -1.15
CLPTM1-207ENST00000587537 TRBV19A0A075B6N1 114 aa7.83□□□□□ -1.16
CLPTM1-207ENST00000587537 OR4C46A6NHA9 309 aa7.83□□□□□ -1.16
CLPTM1-207ENST00000587537 ZNF785A8K8V0 405 aa7.83□□□□□ -1.16
CLPTM1-207ENST00000587537 ISLRO14498 428 aa7.83□□□□□ -1.16
CLPTM1-207ENST00000587537 MRPS12O15235 138 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms