RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 HOXA5P20719 270 aa17.75■□□□□ 0.43
CCDC47-204ENST00000582252 OR5I1Q13606 314 aa17.74■□□□□ 0.43
CCDC47-204ENST00000582252 BAGE2Q86Y30 109 aa17.74■□□□□ 0.43
CCDC47-204ENST00000582252 S4R3C0 116 aa17.74■□□□□ 0.43
CCDC47-204ENST00000582252 F8W735 103 aaPredicted RBP17.73■□□□□ 0.43
CCDC47-204ENST00000582252 PHOX2AO14813 284 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 IGLV2-8P01709 118 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 IBA57Q5T440 356 aaKnown RBP17.73■□□□□ 0.43
CCDC47-204ENST00000582252 BRD3OSQ6XYD6 125 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 WFDC11Q8NEX6 87 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 FMC1Q96HJ9 113 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 V9GYV3 84 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 FLNBO75369 2602 aaKnown RBP17.73■□□□□ 0.43
CCDC47-204ENST00000582252 AKAP9Q99996 3911 aa17.73■□□□□ 0.43
CCDC47-204ENST00000582252 ACTL10Q5JWF8 245 aa17.72■□□□□ 0.43
CCDC47-204ENST00000582252 LYPD1Q8N2G4 141 aa17.72■□□□□ 0.43
CCDC47-204ENST00000582252 MAPK1IP1LQ8NDC0 245 aa17.72■□□□□ 0.43
CCDC47-204ENST00000582252 CHRDL1Q9BU40 450 aa17.72■□□□□ 0.43
CCDC47-204ENST00000582252 CDX1P47902 265 aaPredicted RBP17.72■□□□□ 0.43
CCDC47-204ENST00000582252 CMTM2Q8TAZ6 248 aa17.72■□□□□ 0.43
CCDC47-204ENST00000582252 KLF12Q9Y4X4 402 aa17.72■□□□□ 0.43
CCDC47-204ENST00000582252 SVEP1Q4LDE5 3571 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 ZNF98A6NK75 572 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 SLC17A3O00476 420 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 SNRPCP09234 159 aaKnown RBP17.71■□□□□ 0.43
CCDC47-204ENST00000582252 IGHV4-31P0DP07 118 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 IGHV4-38-2P0DP08 117 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 GNG5P63218 68 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 ZNF586Q9NXT0 402 aa17.71■□□□□ 0.43
CCDC47-204ENST00000582252 TLN2Q9Y4G6 2542 aa17.71■□□□□ 0.42
CCDC47-204ENST00000582252 ZNF469Q96JG9 3925 aaPredicted RBP17.71■□□□□ 0.42
CCDC47-204ENST00000582252 TRBV9A0A0B4J1U6 114 aa17.7■□□□□ 0.42
CCDC47-204ENST00000582252 OR2T8A6NH00 312 aa17.7■□□□□ 0.42
CCDC47-204ENST00000582252 FAM231DQ6ZW35 169 aa17.7■□□□□ 0.42
CCDC47-204ENST00000582252 LINC00479Q96M42 142 aa17.7■□□□□ 0.42
CCDC47-204ENST00000582252 PITPNC1Q9UKF7 332 aa17.7■□□□□ 0.42
CCDC47-204ENST00000582252 TEX15Q9BXT5 2789 aa17.7■□□□□ 0.42
CCDC47-204ENST00000582252 J3QLI3 93 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 M0QZK8 103 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 TGFAP01135 160 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 TCRAP04437 139 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 CRIP2P52943 208 aaPredicted RBP17.69■□□□□ 0.42
CCDC47-204ENST00000582252 RHOGP84095 191 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 USF2Q15853 346 aaPredicted RBP17.69■□□□□ 0.42
CCDC47-204ENST00000582252 C15orf32Q32M92 178 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 TMEM219Q86XT9 240 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 ZNF502Q8TBZ5 544 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 RNASE7Q9H1E1 156 aaKnown RBP17.69■□□□□ 0.42
CCDC47-204ENST00000582252 RPH3ALQ9UNE2 315 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 TRBV19A0A075B6N1 114 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 CTSGP08311 255 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 PIFOQ8TCI5 191 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 EEF1AKMT3Q96AZ1 226 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 GPR82Q96P67 336 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 RABAC1Q9UI14 185 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 TRAPPC1Q9Y5R8 145 aa17.69■□□□□ 0.42
CCDC47-204ENST00000582252 TRAV34A0A0B4J273 112 aa17.68■□□□□ 0.42
CCDC47-204ENST00000582252 BMPR1BO00238 502 aa17.68■□□□□ 0.42
CCDC47-204ENST00000582252 IGHV3-23P01764 117 aa17.68■□□□□ 0.42
CCDC47-204ENST00000582252 IGLC2P0DOY2 106 aa17.68■□□□□ 0.42
CCDC47-204ENST00000582252 PDE6HQ13956 83 aa17.68■□□□□ 0.42
CCDC47-204ENST00000582252 SMIM6P0DI80 62 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 MEOX2P50222 304 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 COX19Q49B96 90 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 ATP6V0BQ99437 205 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 SERTAD4Q9NUC0 356 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 BAHCC1Q9P281 2608 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 TRBV7-1A0A0A6YYK4 115 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 TRAV41A0A0B4J266 112 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 ZNF705GA8MUZ8 300 aaPredicted RBP17.67■□□□□ 0.42
CCDC47-204ENST00000582252 H3BTX0 84 aa17.67■□□□□ 0.42
CCDC47-204ENST00000582252 RPL15P61313 204 aaKnown RBP17.67■□□□□ 0.42
CCDC47-204ENST00000582252 K7EQM0 130 aa17.66■□□□□ 0.42
CCDC47-204ENST00000582252 GATCO43716 136 aaKnown RBP17.66■□□□□ 0.42
CCDC47-204ENST00000582252 RPL7P18124 248 aaKnown RBP17.66■□□□□ 0.42
CCDC47-204ENST00000582252 S100A2P29034 98 aa17.66■□□□□ 0.42
CCDC47-204ENST00000582252 CYB5R2Q6BCY4 276 aa17.66■□□□□ 0.42
CCDC47-204ENST00000582252 NHLRC2Q8NBF2 726 aa17.66■□□□□ 0.42
CCDC47-204ENST00000582252 C12orf57Q99622 126 aa17.66■□□□□ 0.42
CCDC47-204ENST00000582252 A6NDX4 124 aa17.65■□□□□ 0.42
CCDC47-204ENST00000582252 G3V318 75 aa17.65■□□□□ 0.42
CCDC47-204ENST00000582252 MRPS12O15235 138 aaKnown RBP17.65■□□□□ 0.42
CCDC47-204ENST00000582252 GPR183P32249 361 aa17.65■□□□□ 0.42
CCDC47-204ENST00000582252 RAB9AP51151 201 aa17.65■□□□□ 0.42
CCDC47-204ENST00000582252 CELSR1Q9NYQ6 3014 aa17.65■□□□□ 0.42
CCDC47-204ENST00000582252 TRBV6-1A0A0K0K1D8 114 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 SH2D7A6NKC9 451 aaPredicted RBP17.64■□□□□ 0.41
CCDC47-204ENST00000582252 FAM223BA6NKX1 122 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 H3BUX3 64 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 FAM223AQ8IWN6 122 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 OR8I2Q8N0Y5 310 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 ZNF414Q96IQ9 312 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 AAMDCQ9H7C9 122 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 ACANP16112 2415 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 LTAP01374 205 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 C9orf152Q5JTZ5 239 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 GRAMD2BQ96HH9 432 aa17.64■□□□□ 0.41
CCDC47-204ENST00000582252 SMIM27A0A1W2PRY6 76 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 LINC01548A6NM66 108 aa17.63■□□□□ 0.41
CCDC47-204ENST00000582252 AMY1AP04745 511 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms