RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-217	ENST00000580583	SMUG1	Q53HV7	270 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	C9orf152	Q5JTZ5	239 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	IBA57	Q5T440	356 aa	Known RBP	4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	FAM231D	Q6ZW35	169 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	LYPD1	Q8N2G4	141 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	NHLRC2	Q8NBF2	726 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	FRZB	Q92765	325 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	CCDC140	Q96MF4	163 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	CHRDL1	Q9BU40	450 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	ZFAND3	Q9H8U3	227 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	GNB4	Q9HAV0	340 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	RABAC1	Q9UI14	185 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	ZNF580	Q9UK33	172 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	KLF12	Q9Y4X4	402 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583		V9GYV3	84 aa		4.92	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TRAV34	A0A0B4J273	112 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TRBV6-1	A0A0K0K1D8	114 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	ZNF320	A2RRD8	509 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	LINC01548	A6NM66	108 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	SLC17A3	O00476	420 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	PHOX2A	O14813	284 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	BRI3	O95415	125 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TGFA	P01135	160 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	AVP	P01185	164 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	FSHB	P01225	129 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	LTA	P01374	205 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	IGHG2	P01859	326 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TRGV3	P03979	118 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	S100A8	P05109	93 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TRGC1	P0CF51	173 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	PLA2G2A	P14555	144 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	COL8A1	P27658	744 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	RAB9A	P51151	201 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TPPP2	P59282	170 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	RPL19	P84098	196 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	REL	Q04864	619 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	ATP5G2	Q06055	141 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	OR5I1	Q13606	314 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TOMM20L	Q6UXN7	152 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	CLEC19A	Q6UXS0	136 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	SIGLEC15	Q6ZMC9	328 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	GOLT1A	Q6ZVE7	132 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	BAGE2	Q86Y30	109 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	EXOC3-AS1	Q8N2X6	119 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	TMEM75	Q8N9X5	138 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	MBD6	Q96DN6	1003 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	LINC00479	Q96M42	142 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	MS4A10	Q96PG2	267 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	RNASE7	Q9H1E1	156 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	AAMDC	Q9H7C9	122 aa		4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	SOX21	Q9Y651	276 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-217	ENST00000580583	WNK2	Q9Y3S1	2297 aa		4.9	□□□□□ -1.62
PPP4R1-217	ENST00000580583	SERTM2	A0A1B0GWG4	89 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583		K7EQM0	130 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF253	O75346	499 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SMIM6	P0DI80	62 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	NDUFA6	P56556	154 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	RPL15	P61313	204 aa	Known RBP	4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PSG9	Q00887	426 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	DEFB112	Q30KQ8	113 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	COX19	Q49B96	90 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CT83	Q5H943	113 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PRR27	Q6MZM9	219 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	C9orf139	Q6ZV77	190 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	OR8I2	Q8N0Y5	310 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MAPK1IP1L	Q8NDC0	245 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	OR5R1	Q8NH85	324 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF414	Q96IQ9	312 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GPR82	Q96P67	336 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	METTL26	Q96S19	204 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ZNF492	Q9P255	531 aa		4.9	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.89	□□□□□ -1.63	4e-7	■■■■■ 47
PPP4R1-217	ENST00000580583	ANKRD17	O75179	2603 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583		A0A087X0K7	114 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGHV3-35	A0A0C4DH35	117 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SMIM27	A0A1W2PRY6	76 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583		J3QKU1	62 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GATC	O43716	136 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	IGHV4-59	P01825	116 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	MT-ND6	P03923	174 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CLEC3B	P05452	202 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	HOXA5	P20719	270 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	ARL3	P36405	182 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	CSN1S1	P47710	185 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	TCL1A	P56279	114 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	C1orf194	Q5T5A4	169 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	WDR73	Q6P4I2	378 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	PRSS57	Q6UWY2	283 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	KRTAP1-3	Q8IUG1	177 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	LINC00518	Q8N0U6	118 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	BCL6B	Q8N143	479 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GBGT1	Q8N5D6	347 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	GRAMD2B	Q96HH9	432 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	USMG5	Q96IX5	58 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SGK494	Q96LW2	274 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583		Q96MF0	132 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	KRTAP4-8	Q9BYQ9	185 aa		4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	RPP21	Q9H633	154 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-217	ENST00000580583	SERTAD4	Q9NUC0	356 aa		4.89	□□□□□ -1.63

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