RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 FKBP14Q9NWM8 211 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 OPTCQ9UBM4 332 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 FBXO5Q9UKT4 447 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CPDO75976 1380 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 KDM6AO15550 1401 aaPredicted RBP-0.24□□□□□ -2.45
CDH1-211ENST00000567320 SOGA1O94964 1423 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CD109Q6YHK3 1445 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 WDR97A6NE52 1622 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 LRP5O75197 1615 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 CAMSAP1Q5T5Y3 1602 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 BIVM-ERCC5R4GMW8 1640 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 PIK3C2AO00443 1686 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 ANK1P16157 1881 aa-0.24□□□□□ -2.45
CDH1-211ENST00000567320 ASH1LQ9NR48 2969 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 hCG_1818297A0A087WSY0 165 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 A0A087WUJ7 227 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 IGLV3-32A0A0A0MS00 114 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 A0A0G2JMM0 328 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 A0A1W2PPB8 328 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 DUXBA0A1W2PPF3 345 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 hADV38S2A0JD32 116 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 ERICH2A1L162 156 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 C7orf71A4D174 169 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 CLDN24A6NM45 220 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 A8MT66 165 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 KIR3DP1A8MWS1 328 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 HSBP1L1C9JCN9 74 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 LRRN3E7EW58 273 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 FXYD1O00168 92 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 PSMD12O00232 456 aaPredicted RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 KPNA3O00505 521 aaPredicted RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 CALUO43852 315 aaPredicted RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 LYPLA2O95372 231 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 IFNA10P01566 189 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 IGKCP01834 107 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TNNC2P02585 160 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TTRP02766 147 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 CRHP06850 196 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TPM1P09493 284 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 HIST1H1EP10412 219 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 IDO1P14902 403 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 MYL12AP19105 171 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 PTMSP20962 102 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 CASQ1P31415 396 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 ATP5G3P48201 142 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 DYNLT3P51808 116 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 AP2S1P53680 142 aaPredicted RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 PIGPP57054 158 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 YPEL3P61236 119 aaPredicted RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 RHOBP62745 196 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 RANP62826 216 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 UBE2BP63146 152 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 CDK6Q00534 326 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 MIR22HGQ0VDD5 57 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TMED1Q13445 227 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 POU6F1Q14863 301 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 MSMO1Q15800 293 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 IMPG1Q17R60 797 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 HIST2H3PS2Q5TEC6 136 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 XAF1Q6GPH4 301 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 C22orf39Q6P5X5 142 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 ARPINQ7Z6K5 226 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TRAPPC6BQ86SZ2 158 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TEN1Q86WV5 123 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 C20orf196Q8IYI0 205 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 SYCE1Q8N0S2 351 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 OR6V1Q8N148 313 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 KRT222Q8N1A0 295 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 LINC00269Q8N2A0 174 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 CLDN22Q8N7P3 220 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 GDPD1Q8N9F7 314 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 C4orf3Q8WVX3 66 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 HYLS1Q96M11 299 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 C20orf27Q9GZN8 174 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 FAM96AQ9H5X1 160 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 RNF122Q9H9V4 155 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 UQCC1Q9NVA1 299 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 HSPB8Q9UJY1 196 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 GUCA1BQ9UMX6 200 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 NOSIPQ9Y314 301 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 PRELID3BQ9Y3B1 194 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 DSPPQ9NZW4 1301 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 MAP3K5Q99683 1374 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 C9orf84Q5VXU9 1444 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 NCAPD3P42695 1498 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 LAMC1P11047 1609 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 PPRC1Q5VV67 1664 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 UBR2Q8IWV8 1755 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 DLEC1Q9Y238 1755 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 AFDNP55196 1824 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 VIRMAQ69YN4 1812 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 SCN8AQ9UQD0 1980 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 SNRNP200O75643 2136 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 HEATR1Q9H583 2144 aaKnown RBP-0.25□□□□□ -2.45
CDH1-211ENST00000567320 FLNCQ14315 2725 aa-0.25□□□□□ -2.45
CDH1-211ENST00000567320 TENM4Q6N022 2769 aa-0.26□□□□□ -2.45
CDH1-211ENST00000567320 SRRM2Q9UQ35 2752 aaKnown RBP-0.26□□□□□ -2.45
CDH1-211ENST00000567320 CACNA1HO95180 2353 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms