RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 TMEM256Q8N2U0 113 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 WFDC11Q8NEX6 87 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 BPIFB6Q8NFQ5 453 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 ITLN2Q8WWU7 325 aaPredicted RBP3.12□□□□□ -1.91
CHD9-214ENST00000565119 DIRC1Q969H9 104 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 PKMYT1Q99640 499 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 SLC35B3Q9H1N7 401 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 SAR1AQ9NR31 198 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 TXNL4BQ9NX01 149 aaKnown RBP3.12□□□□□ -1.91
CHD9-214ENST00000565119 FKBP11Q9NYL4 201 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 NOP16Q9Y3C1 178 aaKnown RBP3.12□□□□□ -1.91
CHD9-214ENST00000565119 PHLDA3Q9Y5J5 127 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 DNAJC15Q9Y5T4 150 aa3.12□□□□□ -1.91
CHD9-214ENST00000565119 MED1Q15648 1581 aaPredicted RBP3.12□□□□□ -1.91
CHD9-214ENST00000565119 ADGRL1O94910 1474 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 DSCAMO60469 2012 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 N4BP2Q86UW6 1770 aaPredicted RBP3.11□□□□□ -1.91
CHD9-214ENST00000565119 NISCHQ9Y2I1 1504 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 A0A1W2PPR1 153 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 K7ERS5 55 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 HBDP02042 147 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 IGKV1-16P04430 117 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 OR5AC1P0C628 307 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 TRGC1P0CF51 173 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 FAM78AQ5JUQ0 283 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 BPIFA4PQ86YQ2 179 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 PCP2Q8IVA1 136 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 AMN1Q8IY45 258 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 Q8N2B8 174 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 SVBPQ8N300 66 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 OR4X2Q8NGF9 303 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 OTOSQ8NHW6 89 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 LINC01006Q8NI28 216 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 AQP10Q96PS8 301 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 HIST1H2BLQ99880 126 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 NPCDR1Q9BY65 106 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 PLA2G12AQ9BZM1 189 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 OSTCQ9NRP0 149 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 ZSWIM8A7E2V4 1837 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 FRMPD1Q5SYB0 1578 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 MYH13Q9UKX3 1938 aa3.11□□□□□ -1.91
CHD9-214ENST00000565119 CCDC88BA6NC98 1476 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 KIF13AQ9H1H9 1805 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 TRGV5A0A0B4J1U4 118 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 C3orf85A0A1B0GTC6 90 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 G3V3Q6 166 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 H3BT86 120 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 APOC4-APOC2K7ER74 178 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 M0R2P5 195 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 PITX3O75364 302 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 INSP01308 110 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 APOC2P02655 101 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 MT-ND6P03923 174 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 LINC00032P0C843 101 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 CCL3P10147 92 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 CCL5P13501 91 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 LSM3P62310 102 aaKnown RBP3.1□□□□□ -1.91
CHD9-214ENST00000565119 SNRPD3P62318 126 aaKnown RBP3.1□□□□□ -1.91
CHD9-214ENST00000565119 C16orf47Q6ZP98 133 aaPredicted RBP3.1□□□□□ -1.91
CHD9-214ENST00000565119 LINC00299Q6ZSB3 139 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 MIR17HGQ75NE6 70 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 HIST3H2BBQ8N257 126 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 KLHL30-AS1Q8NEE0 82 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 OR5AK2Q8NH90 309 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 RBMXL1Q96E39 390 aaKnown RBP3.1□□□□□ -1.91
CHD9-214ENST00000565119 UPK3BQ9BT76 320 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 EPDR1Q9UM22 224 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 LINC00312Q9Y6C7 94 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 SERP1Q9Y6X1 66 aa3.1□□□□□ -1.91
CHD9-214ENST00000565119 SIPA1L1O43166 1804 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 COL1A1P02452 1464 aaPredicted RBP3.09□□□□□ -1.91
CHD9-214ENST00000565119 ABCC3O15438 1527 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 TOPBP1Q92547 1522 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 A0A0J9YW62 118 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 K7ERJ3 54 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 HLA-DQA1P01909 254 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 PMP2P02689 132 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 P0C879 139 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 FXYD7P58549 80 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 Q1RN00 199 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 C9orf153Q5TBE3 101 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 EIF5AL1Q6IS14 154 aaKnown RBP3.09□□□□□ -1.91
CHD9-214ENST00000565119 KRTAP5-7Q6L8G8 165 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 Q6ZUT4 128 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 C14orf178Q8N769 122 aaPredicted RBP3.09□□□□□ -1.91
CHD9-214ENST00000565119 C3orf56Q8N813 242 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 RAB37Q96AX2 223 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 VAMP8Q9BV40 100 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 LSM2Q9Y333 95 aaKnown RBP3.09□□□□□ -1.91
CHD9-214ENST00000565119 SVILO95425 2214 aa3.09□□□□□ -1.91
CHD9-214ENST00000565119 NUP98P52948 1817 aa3.09□□□□□ -1.92
CHD9-214ENST00000565119 ANAPC1Q9H1A4 1944 aa3.09□□□□□ -1.92
CHD9-214ENST00000565119 POLA1P09884 1462 aaPredicted RBP3.09□□□□□ -1.92
CHD9-214ENST00000565119 DLC1Q96QB1 1528 aa3.09□□□□□ -1.92
CHD9-214ENST00000565119 RIMBP3CA6NJZ7 1639 aa3.08□□□□□ -1.92
CHD9-214ENST00000565119 RIMBP3BA6NNM3 1639 aa3.08□□□□□ -1.92
CHD9-214ENST00000565119 RIMBP3Q9UFD9 1639 aa3.08□□□□□ -1.92
CHD9-214ENST00000565119 KIF20BQ96Q89 1820 aa3.08□□□□□ -1.92
CHD9-214ENST00000565119 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms