RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 PRRG2O14669 202 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 ACTL6BO94805 426 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 P01737 135 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 COL8A2P25067 703 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FKBP2P26885 142 aaKnown RBP5.04□□□□□ -1.6
PTPN9-204ENST00000564970 EDDM3BP56851 147 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FBXW4P57775 412 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FKBP1BP68106 108 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 CCL8P80075 99 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 ATXN8Q156A1 80 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 PLPP4Q5VZY2 271 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 Q5XG85 94 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 Q6ZRM9 215 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 AAED1Q7RTV5 226 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 ZAR1Q86SH2 424 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 RPS19BP1Q86WX3 136 aaKnown RBP5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FAM90A1Q86YD7 464 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 Q8N1Y9 231 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FGFRL1Q8N441 504 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 KLHDC9Q8NEP7 349 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 RFESDQ8TAC1 157 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 SCAMP4Q969E2 229 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 SPTSSAQ969W0 71 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 UBE2WQ96B02 151 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FMC1Q96HJ9 113 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 SPACA5Q96QH8 159 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FOXQ1Q9C009 403 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 PRDM14Q9GZV8 571 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 DYNLRB1Q9NP97 96 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 ATG2BQ96BY7 2078 aa5.04□□□□□ -1.6
PTPN9-204ENST00000564970 FLNBO75369 2602 aaKnown RBP5.04□□□□□ -1.6
PTPN9-204ENST00000564970 GTF3C1Q12789 2109 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 NCOA6Q14686 2063 aaPredicted RBP5.03□□□□□ -1.6
PTPN9-204ENST00000564970 ASH1LQ9NR48 2969 aaKnown RBP5.03□□□□□ -1.6
PTPN9-204ENST00000564970 RALGAPA1Q6GYQ0 2036 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 TRAV12-2A0A075B6T6 113 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 TRAV17A0A0B4J275 112 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 TRGV8A0A0C4DH27 118 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 TRBV10-2A0A0K0K1G8 114 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 FAM236AA0A1B0GUQ0 79 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 FAM236BA0A1B0GV22 79 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 RBAKDNA6NC62 111 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 LINC01549A6NIU2 74 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 SRRM4A7MD48 611 aaKnown RBP5.03□□□□□ -1.6
PTPN9-204ENST00000564970 METTL12A8MUP2 240 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 A8MZ25 164 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 OOSP1A8MZH6 123 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 FOXS1O43638 330 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 PYYP10082 97 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 B4GALT1P15291 398 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 CA6P23280 308 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 PRR20EP86478 221 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 PRR20CP86479 221 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 PRR20DP86480 221 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 PRR20BP86481 221 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 PRR20AP86496 221 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 LINC00336Q6ZUF6 198 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 IL17RELQ6ZVW7 336 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 STPG3Q8N7X2 389 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 AGPAT4-IT1Q9H0P7 198 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 C7orf69Q9H7B7 122 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 NXT2Q9NPJ8 142 aaKnown RBP5.03□□□□□ -1.6
PTPN9-204ENST00000564970 OCIAD1Q9NX40 245 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 HHLA3Q9XRX5 114 aa5.03□□□□□ -1.6
PTPN9-204ENST00000564970 KLF13Q9Y2Y9 288 aaPredicted RBP5.03□□□□□ -1.6
PTPN9-204ENST00000564970 AMMECR1Q9Y4X0 333 aaPredicted RBP5.03□□□□□ -1.6
PTPN9-204ENST00000564970 HEATR5BQ9P2D3 2071 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 TRAV12-1A0A0B4J245 112 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 IGKV1D-13A0A0B4J2D9 117 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 IGKV1-8A0A0C4DH67 115 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 LOC107984156A0A0G2JMH3 177 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 C19orf71A6NCJ1 209 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 EPM2AB3EWF7 344 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 J3QQQ9 107 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 PEX7O00628 323 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 IGKV1-39P01597 117 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 IGKV1D-39P04432 117 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 IGKV1-13P0DP09 117 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 COX6A1P12074 109 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 PFN2P35080 140 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 NXPH1P58417 271 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 HIST1H4AP62805 103 aaKnown RBP5.02□□□□□ -1.61
PTPN9-204ENST00000564970 IGLV3-21P80748 117 aaPredicted RBP5.02□□□□□ -1.61
PTPN9-204ENST00000564970 HRCT1Q6UXD1 115 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 Q6ZT83 130 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 FAM214BQ7L5A3 538 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 GTSCR1Q86UQ5 136 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 ARL17AQ8IVW1 177 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 ORMDL3Q8N138 153 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 CHCHD5Q9BSY4 110 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 SHANK2-AS3Q9BTD1 123 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 RTL8AQ9BWD3 113 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 PLA2G2FQ9BZM2 168 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 C6orf106Q9H6K1 298 aaPredicted RBP5.02□□□□□ -1.61
PTPN9-204ENST00000564970 RAXQ9Y2V3 346 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 PYGO1Q9Y3Y4 419 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 SERP1Q9Y6X1 66 aa5.02□□□□□ -1.61
PTPN9-204ENST00000564970 DNAH14Q0VDD8 3507 aa5.01□□□□□ -1.61
PTPN9-204ENST00000564970 TRGV11A0A075B6L2 103 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms