RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 PERPQ96FX8 193 aa16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 SLC25A15Q9Y619 301 aa16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 IFI27P40305 119 aaPredicted RBP16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 C2orf91Q6ZV80 131 aa16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 IGFBPL1Q8WX77 278 aa16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 CHCHD1Q96BP2 118 aaKnown RBP16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 COL12A1Q99715 3063 aa16.4■□□□□ 0.22
MAP1LC3B-206ENST00000564844 FBLL1A6NHQ2 334 aaKnown RBP16.39■□□□□ 0.22
MAP1LC3B-206ENST00000564844 K7EMI3 77 aa16.39■□□□□ 0.22
MAP1LC3B-206ENST00000564844 IGHV1-46P01743 117 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PPBPP02775 128 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 MYCNOSP40205 109 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FA2HQ7L5A8 372 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 CSTL1Q9H114 145 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 THYN1Q9P016 225 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 CD5LO43866 347 aa16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 HIST1H1AQ02539 215 aaPredicted RBP16.39■□□□□ 0.21
MAP1LC3B-206ENST00000564844 CD59P13987 128 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 BMI1P35226 326 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 JMJD8Q96S16 334 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PRSS22Q9GZN4 317 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PEF1Q9UBV8 284 aaKnown RBP16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 K7ERU9 68 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 TMEM97Q5BJF2 176 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 RABAC1Q9UI14 185 aa16.38■□□□□ 0.21
MAP1LC3B-206ENST00000564844 SPAARA0A1B0GVQ0 90 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 RBP4P02753 201 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 NMUP48645 174 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FAM27E3Q08E93 113 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 CCL17Q92583 94 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 HSPB8Q9UJY1 196 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 C19orf71A6NCJ1 209 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 C5orf17Q8NAS9 161 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 OSR1Q8TAX0 266 aaPredicted RBP16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 SMKR1H3BMG3 65 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 SUB1P53999 127 aaKnown RBP eCLIP16.37■□□□□ 0.217e-7■■□□□ 12.6
MAP1LC3B-206ENST00000564844 TMEM108Q6UXF1 575 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 TTTY13Q9BZ97 58 aa16.37■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ATRXP46100 2492 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 COL6A6A6NMZ7 2263 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ARHGAP32A7KAX9 2087 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 M0R3E3 92 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 TNFRSF1AP19438 455 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ZNF474Q6S9Z5 364 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PET117Q6UWS5 81 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 DKK4Q9UBT3 224 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 CDX4O14627 284 aaPredicted RBP16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 LTAP01374 205 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 OR4C13Q8NGP0 309 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 DCHS2Q6V1P9 2916 aa16.36■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PRR33A8MZF0 331 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 IGLC1P0CG04 106 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 CACNG7P62955 275 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ZNF788Q6ZQV5 615 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ZNF747Q9BV97 191 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 A6NJY4 79 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ZNF207O43670 478 aaKnown RBP16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 TMEM200BQ69YZ2 307 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 LYPD2Q6UXB3 125 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 C18orf15Q96N68 181 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PLSCR4Q9NRQ2 329 aa16.35■□□□□ 0.21
MAP1LC3B-206ENST00000564844 TMEM213A2RRL7 107 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FCN3O75636 299 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 COX8AP10176 69 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 A0A1B0GUT8 65 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 SEM1Q6ZVN7 128 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 PCP2Q8IVA1 136 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FER1L6-AS1Q8NA97 138 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FAM222BQ8WU58 562 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 RAB9BQ9NP90 201 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 GLRXP35754 106 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FAM162BQ5T6X4 162 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 Q86TA4 180 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 NDFIP1Q9BT67 221 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 KLF12Q9Y4X4 402 aa16.34■□□□□ 0.21
MAP1LC3B-206ENST00000564844 GP9P14770 177 aa16.33■□□□□ 0.21
MAP1LC3B-206ENST00000564844 ZNF833PQ6ZTB9 187 aa16.33■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FMC1Q96HJ9 113 aa16.33■□□□□ 0.21
MAP1LC3B-206ENST00000564844 FAM71F2Q6NXP2 309 aa16.33■□□□□ 0.2
MAP1LC3B-206ENST00000564844 D6R8Y8 96 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 LINC01545Q5VT33 79 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 OR5AN1Q8NGI8 311 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 AMN1Q8IY45 258 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 ZNF785A8K8V0 405 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 KIR3DS1Q14943 382 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 ZADH2Q8N4Q0 377 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 TMEM167AQ8TBQ9 72 aa16.32■□□□□ 0.2
MAP1LC3B-206ENST00000564844 C1orf162Q8NEQ5 155 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-206ENST00000564844 C8orf49Q96NF6 230 aa16.31■□□□□ 0.2
MAP1LC3B-206ENST00000564844 PIP4P2Q8N4L2 257 aa16.31■□□□□ 0.2
MAP1LC3B-206ENST00000564844 OR10AG1Q8NH19 301 aa16.31■□□□□ 0.2
MAP1LC3B-206ENST00000564844 IGLV2-23P01705 113 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 CSN1S1P47710 185 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 RPL24P83731 157 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 DEFB124Q8NES8 71 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 C1RLQ9NZP8 487 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 SP9P0CG40 484 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 BCL6BQ8N143 479 aaPredicted RBP16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 THAP8Q8NA92 274 aa16.3■□□□□ 0.2
MAP1LC3B-206ENST00000564844 HIGD1AQ9Y241 93 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms