RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 RLN2P04090 185 aa12.59□□□□□ -0.39
KATNB1-202ENST00000562542 LGI3Q8N145 548 aa12.59□□□□□ -0.39
KATNB1-202ENST00000562542 OR13C8Q8NGS7 320 aa12.59□□□□□ -0.39
KATNB1-202ENST00000562542 U3KQ87 197 aa12.59□□□□□ -0.39
KATNB1-202ENST00000562542 TNFAIP8O95379 198 aa12.58□□□□□ -0.4
KATNB1-202ENST00000562542 TGFBR1P36897 503 aa12.58□□□□□ -0.4
KATNB1-202ENST00000562542 TMEM268Q5VZI3 342 aa12.58□□□□□ -0.4
KATNB1-202ENST00000562542 OR1B1Q8NGR6 318 aa12.58□□□□□ -0.4
KATNB1-202ENST00000562542 LHFPL5Q8TAF8 219 aa12.58□□□□□ -0.4
KATNB1-202ENST00000562542 CACFD1Q9UGQ2 172 aa12.58□□□□□ -0.4
KATNB1-202ENST00000562542 TEX13DA0A0J9YY54 714 aaPredicted RBP12.57□□□□□ -0.4
KATNB1-202ENST00000562542 ZNF98A6NK75 572 aa12.57□□□□□ -0.4
KATNB1-202ENST00000562542 GPX4P36969 197 aaPredicted RBP12.57□□□□□ -0.4
KATNB1-202ENST00000562542 SCGB2B2Q4G0G5 96 aa12.57□□□□□ -0.4
KATNB1-202ENST00000562542 CCDC28AQ8IWP9 274 aa12.57□□□□□ -0.4
KATNB1-202ENST00000562542 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
KATNB1-202ENST00000562542 A0A096LPF7 62 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 TRAV8-2A0A0B4J237 113 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 KRTAP29-1A8MX34 341 aaPredicted RBP12.56□□□□□ -0.4
KATNB1-202ENST00000562542 NXPH4O95158 308 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 CD3DP04234 171 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 SULT1A3P0DMM9 295 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 SULT1A4P0DMN0 295 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 RPS19P39019 145 aaKnown RBP12.56□□□□□ -0.4
KATNB1-202ENST00000562542 LINC00612Q8N6U2 182 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 MARCH1Q8TCQ1 289 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 DTD1Q8TEA8 209 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 GLYATL2Q8WU03 294 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 TRGV9Q99603 122 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 TMPRSS5Q9H3S3 457 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 COMMD3Q9UBI1 195 aa12.56□□□□□ -0.4
KATNB1-202ENST00000562542 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
KATNB1-202ENST00000562542 H7BYZ3 331 aa12.55□□□□□ -0.4
KATNB1-202ENST00000562542 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
KATNB1-202ENST00000562542 OR4D5Q8NGN0 318 aa12.55□□□□□ -0.4
KATNB1-202ENST00000562542 TERB2Q8NHR7 220 aa12.55□□□□□ -0.4
KATNB1-202ENST00000562542 GPR82Q96P67 336 aa12.55□□□□□ -0.4
KATNB1-202ENST00000562542 C14orf166Q9Y224 244 aaKnown RBP12.55□□□□□ -0.4
KATNB1-202ENST00000562542 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
KATNB1-202ENST00000562542 ORM2P19652 201 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 CDKN1BP46527 198 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 NEDD8Q15843 81 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 GGNBP1Q5YKI7 109 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 TMEM70Q9BUB7 260 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 RBKSQ9H477 322 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 NAA60Q9H7X0 242 aa12.54□□□□□ -0.4
KATNB1-202ENST00000562542 ANKRD65E5RJM6 399 aa12.53□□□□□ -0.4
KATNB1-202ENST00000562542 APOA1P02647 267 aa12.53□□□□□ -0.4
KATNB1-202ENST00000562542 PRB4P10163 310 aaPredicted RBP12.53□□□□□ -0.4
KATNB1-202ENST00000562542 S100A7P31151 101 aa12.53□□□□□ -0.4
KATNB1-202ENST00000562542 TMEM147Q9BVK8 224 aa12.53□□□□□ -0.4
KATNB1-202ENST00000562542 PAIP2BQ9ULR5 123 aaKnown RBP12.53□□□□□ -0.4
KATNB1-202ENST00000562542 RAB26Q9ULW5 256 aa12.53□□□□□ -0.4
KATNB1-202ENST00000562542 SLC45A2Q9UMX9 530 aa12.53□□□□□ -0.4
KATNB1-202ENST00000562542 TRAV9-2A0A087WT02 112 aa12.52□□□□□ -0.41
KATNB1-202ENST00000562542 IGLV5-52A0A0A0MRZ9 124 aa12.52□□□□□ -0.41
KATNB1-202ENST00000562542 PLA2G1BP04054 148 aaKnown RBP12.52□□□□□ -0.41
KATNB1-202ENST00000562542 TBPP20226 339 aa12.52□□□□□ -0.41
KATNB1-202ENST00000562542 OR4D10Q8NGI6 311 aa12.52□□□□□ -0.41
KATNB1-202ENST00000562542 VSIG2Q96IQ7 327 aa12.52□□□□□ -0.41
KATNB1-202ENST00000562542 ATP5IP56385 69 aaPredicted RBP12.51□□□□□ -0.41
KATNB1-202ENST00000562542 LSM3P62310 102 aaKnown RBP12.51□□□□□ -0.41
KATNB1-202ENST00000562542 BPIFCQ8NFQ6 507 aa12.51□□□□□ -0.41
KATNB1-202ENST00000562542 LRRC20Q8TCA0 184 aa12.51□□□□□ -0.41
KATNB1-202ENST00000562542 HSPB7Q9UBY9 170 aa12.51□□□□□ -0.41
KATNB1-202ENST00000562542 PLA2G2DQ9UNK4 145 aa12.51□□□□□ -0.41
KATNB1-202ENST00000562542 HMCN2Q8NDA2 5059 aa12.51□□□□□ -0.41
KATNB1-202ENST00000562542 TRGV2A0A075B6R0 118 aa12.5□□□□□ -0.41
KATNB1-202ENST00000562542 IGKV1OR2-108A0A075B7D4 117 aa12.5□□□□□ -0.41
KATNB1-202ENST00000562542 Q6ZTI0 123 aa12.5□□□□□ -0.41
KATNB1-202ENST00000562542 C20orf144Q9BQM9 153 aa12.5□□□□□ -0.41
KATNB1-202ENST00000562542 TMEM56-RWDD3S4R434 201 aa12.5□□□□□ -0.41
KATNB1-202ENST00000562542 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 RAB3DO95716 219 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 CXCL3P19876 107 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 GATA2P23769 480 aaPredicted RBP12.49□□□□□ -0.41
KATNB1-202ENST00000562542 RAB11AP62491 216 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 PSG3Q16557 428 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 GPR107Q5VW38 600 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 THAP8Q8NA92 274 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 DEFB104AQ8WTQ1 72 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 RTBDNQ9BSG5 229 aaPredicted RBP12.49□□□□□ -0.41
KATNB1-202ENST00000562542 MSRB1Q9NZV6 116 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
KATNB1-202ENST00000562542 HPGDSO60760 199 aa12.48□□□□□ -0.41
KATNB1-202ENST00000562542 CCR6P51684 374 aa12.48□□□□□ -0.41
KATNB1-202ENST00000562542 KIR3DS1Q14943 382 aa12.48□□□□□ -0.41
KATNB1-202ENST00000562542 RPUSD4Q96CM3 377 aaKnown RBP12.48□□□□□ -0.41
KATNB1-202ENST00000562542 PRR13Q9NZ81 148 aa12.48□□□□□ -0.41
KATNB1-202ENST00000562542 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
KATNB1-202ENST00000562542 CRYM-AS1A6NIL9 109 aa12.47□□□□□ -0.41
KATNB1-202ENST00000562542 FAM25AB3EWG3 89 aa12.47□□□□□ -0.41
KATNB1-202ENST00000562542 FAM25CB3EWG5 89 aa12.47□□□□□ -0.41
KATNB1-202ENST00000562542 FAM25GB3EWG6 89 aa12.47□□□□□ -0.41
KATNB1-202ENST00000562542 RPL7P18124 248 aaKnown RBP12.47□□□□□ -0.41
KATNB1-202ENST00000562542 GFI1BQ5VTD9 330 aa12.47□□□□□ -0.41
KATNB1-202ENST00000562542 STEAP1BQ6NZ63 245 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms