RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 KIR3DL3Q8N743 410 aa11.52□□□□□ -0.57
CRTC3-210ENST00000560927 OR2D3Q8NGH3 330 aa11.52□□□□□ -0.57
CRTC3-210ENST00000560927 ASCL2Q99929 193 aa11.52□□□□□ -0.57
CRTC3-210ENST00000560927 SHANK2-AS3Q9BTD1 123 aa11.52□□□□□ -0.57
CRTC3-210ENST00000560927 SNHG12Q9BXW3 62 aa11.52□□□□□ -0.57
CRTC3-210ENST00000560927 IL4P05112 153 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 C5orf64Q2M2E5 130 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 ZNF491Q8N8L2 437 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 SPTBN4Q9H254 2564 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 NDUFS7O75251 213 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 NTF3P20783 257 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 NDPQ00604 133 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 PRNTQ86SH4 94 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 PGLYRP4Q96LB8 373 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 ALKBH7Q9BT30 221 aaPredicted RBP11.51□□□□□ -0.57
CRTC3-210ENST00000560927 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
CRTC3-210ENST00000560927 TRBV19A0A075B6N1 114 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 H3BRN7 92 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 ZFP36P26651 326 aaKnown RBP11.5□□□□□ -0.57
CRTC3-210ENST00000560927 LBHQ53QV2 105 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-210ENST00000560927 VMO1Q7Z5L0 202 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 NEU4Q8WWR8 484 aaPredicted RBP11.5□□□□□ -0.57
CRTC3-210ENST00000560927 RNF125Q96EQ8 232 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 OR2J3O76001 311 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 IGLC2P0DOY2 106 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 ATP5L2Q7Z4Y8 100 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 C20orf144Q9BQM9 153 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 VAMP8Q9BV40 100 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 SPTBN1Q01082 2364 aaKnown RBP11.5□□□□□ -0.57
CRTC3-210ENST00000560927 MED13LQ71F56 2210 aa11.5□□□□□ -0.57
CRTC3-210ENST00000560927 ZNF785A8K8V0 405 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 A8MWL6 223 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 C3orf79P0CE67 100 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 HOXB4P17483 251 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-210ENST00000560927 BPIFA4PQ86YQ2 179 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
CRTC3-210ENST00000560927 FCGR2BP31994 310 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-210ENST00000560927 HBBP68871 147 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 CT83Q5H943 113 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 SIGLEC15Q6ZMC9 328 aa11.49□□□□□ -0.57
CRTC3-210ENST00000560927 ZNF705AQ6ZN79 300 aaPredicted RBP11.49□□□□□ -0.57
CRTC3-210ENST00000560927 DAZAP1Q96EP5 407 aaKnown RBP11.49□□□□□ -0.57
CRTC3-210ENST00000560927 IGLV11-55A0A075B6I3 123 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 F8W735 103 aaPredicted RBP11.48□□□□□ -0.57
CRTC3-210ENST00000560927 MRPS12O15235 138 aaKnown RBP11.48□□□□□ -0.57
CRTC3-210ENST00000560927 KLF5Q13887 457 aaPredicted RBP11.48□□□□□ -0.57
CRTC3-210ENST00000560927 OR4F17Q8NGA8 305 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 ARPC1AQ92747 370 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 WI2-2373I1.2A0A1W2PRP0 233 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 GNG7O60262 68 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 IGHV3-23P01764 117 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 HLA-DRB1P01911 266 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 COL8A1P27658 744 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
CRTC3-210ENST00000560927 WNK2Q9Y3S1 2297 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 DTX2Q86UW9 622 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 CHD8Q9HCK8 2581 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 M0R3E3 92 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 RAB4AP20338 218 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 FOXA3P55318 350 aaPredicted RBP11.47□□□□□ -0.57
CRTC3-210ENST00000560927 NHLH1Q02575 133 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 RNASEKQ6P5S7 137 aaKnown RBP11.47□□□□□ -0.57
CRTC3-210ENST00000560927 URB1-AS1Q96HZ7 61 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 MIEN1Q9BRT3 115 aa11.47□□□□□ -0.57
CRTC3-210ENST00000560927 NPIPB5A8MRT5 1133 aa11.46□□□□□ -0.57
CRTC3-210ENST00000560927 M0R143 59 aa11.46□□□□□ -0.57
CRTC3-210ENST00000560927 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
CRTC3-210ENST00000560927 Q8N6K4 173 aa11.46□□□□□ -0.57
CRTC3-210ENST00000560927 NCOR2Q9Y618 2525 aa11.46□□□□□ -0.58
CRTC3-210ENST00000560927 M0QZ24 198 aa11.46□□□□□ -0.58
CRTC3-210ENST00000560927 OVOL3O00110 214 aa11.46□□□□□ -0.58
CRTC3-210ENST00000560927 HSBP1O75506 76 aa11.46□□□□□ -0.58
CRTC3-210ENST00000560927 LY6DQ14210 128 aa11.46□□□□□ -0.58
CRTC3-210ENST00000560927 GFRA4Q9GZZ7 299 aa11.46□□□□□ -0.58
CRTC3-210ENST00000560927 HIVEP3Q5T1R4 2406 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 NDUFB8O95169 186 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 Q56UQ5 140 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 LCN12Q6JVE5 192 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 C1orf122Q6ZSJ8 110 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 TTC9CQ8N5M4 171 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 BORCS7Q96B45 105 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 CTRLP40313 264 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 MFAP4P55083 255 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 CCDC144NLQ6NUI1 221 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 C16orf54Q6UWD8 224 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 TMEM75Q8N9X5 138 aa11.45□□□□□ -0.58
CRTC3-210ENST00000560927 M0R2Z0 102 aa11.44□□□□□ -0.58
CRTC3-210ENST00000560927 APOHP02749 345 aaPredicted RBP11.44□□□□□ -0.58
CRTC3-210ENST00000560927 NUTF2P61970 127 aaKnown RBP11.44□□□□□ -0.58
CRTC3-210ENST00000560927 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
CRTC3-210ENST00000560927 ATOH7Q8N100 152 aa11.44□□□□□ -0.58
CRTC3-210ENST00000560927 OR4B1Q8NGF8 309 aa11.44□□□□□ -0.58
CRTC3-210ENST00000560927 C21orf62Q9NYP8 219 aa11.44□□□□□ -0.58
CRTC3-210ENST00000560927 PSG8Q9UQ74 426 aa11.44□□□□□ -0.58
CRTC3-210ENST00000560927 TRAV30A0A087WSZ9 112 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms