RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 A0A1B0GXF2 115 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 NPFFO15130 113 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 BRI3O95415 125 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 P01737 135 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 IL4P05112 153 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 FOXA3P55318 350 aaPredicted RBP7.62□□□□□ -1.19
RTF1-206ENST00000560447 RAB4BP61018 213 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 GNG5P63218 68 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 PRB3Q04118 309 aaPredicted RBP7.62□□□□□ -1.19
RTF1-206ENST00000560447 PAX8Q06710 450 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 Q6AWC8 147 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 C16orf54Q6UWD8 224 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 COX8CQ7Z4L0 72 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 BAGE3Q86Y29 109 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 DYNAPQ8N1N2 210 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 NUP35Q8NFH5 326 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 AJUBAQ96IF1 538 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 LINC00479Q96M42 142 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 PIMREGQ9BSJ6 248 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 BPESC1Q9GZL8 116 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 DCHS1Q96JQ0 3298 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 ADGRG4Q8IZF6 3080 aa7.62□□□□□ -1.19
RTF1-206ENST00000560447 HIVEP3Q5T1R4 2406 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 TRAV34A0A0B4J273 112 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 F8W735 103 aaPredicted RBP7.61□□□□□ -1.19
RTF1-206ENST00000560447 BMPR1BO00238 502 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 APCSP02743 223 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 EGR2P11161 476 aaPredicted RBP7.61□□□□□ -1.19
RTF1-206ENST00000560447 NDPQ00604 133 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 KLF5Q13887 457 aaPredicted RBP7.61□□□□□ -1.19
RTF1-206ENST00000560447 Q56UQ5 140 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 SIGLEC15Q6ZMC9 328 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 ZNF414Q96IQ9 312 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 MS4A10Q96PG2 267 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 GSX1Q9H4S2 264 aaPredicted RBP7.61□□□□□ -1.19
RTF1-206ENST00000560447 AAMDCQ9H7C9 122 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 KALRNO60229 2985 aa7.61□□□□□ -1.19
RTF1-206ENST00000560447 CENPVL3A0A0U1RRI6 287 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 VWC2LB2RUY7 222 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 C19orf84I3L1E1 186 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 NDUFS7O75251 213 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 IGLV2-11P01706 119 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 IGHV4-39P01824 125 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 RAB4AP20338 218 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 SAA4P35542 130 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 CSN1S1P47710 185 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 UQCRFS1P47985 274 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 DSCR9P59020 149 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 HBBP68871 147 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 PSG3Q16557 428 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 RBPMS2Q6ZRY4 209 aaKnown RBP7.6□□□□□ -1.19
RTF1-206ENST00000560447 TMEM256Q8N2U0 113 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 GATD1Q8NB37 220 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 KCNS1Q96KK3 526 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 NEU1Q99519 415 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 FAM103A1Q9BTL3 118 aaKnown RBP7.6□□□□□ -1.19
RTF1-206ENST00000560447 MEGF9Q9H1U4 602 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 RABAC1Q9UI14 185 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 FBXL7Q9UJT9 491 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 TP53TG3Q9ULZ0 132 aa7.6□□□□□ -1.19
RTF1-206ENST00000560447 ARHGAP32A7KAX9 2087 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 TPRP12270 2363 aaKnown RBP7.59□□□□□ -1.19
RTF1-206ENST00000560447 A0A087X0K7 114 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 TRBV7-1A0A0A6YYK4 115 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 HIGD1CA8MV81 97 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 DIRC3C9JPN6 131 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 SERF1AO75920 110 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 TCL1AP56279 114 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 DEFA6Q01524 100 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 LBHQ53QV2 105 aaPredicted RBP7.59□□□□□ -1.19
RTF1-206ENST00000560447 C1orf194Q5T5A4 169 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 LEMD1Q68G75 181 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 PRR27Q6MZM9 219 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 MRPL54Q6P161 138 aaKnown RBP7.59□□□□□ -1.19
RTF1-206ENST00000560447 UNQ5815/PRO19632Q6UWF5 114 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 GOLT1AQ6ZVE7 132 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 CIARTQ8N365 385 aaPredicted RBP7.59□□□□□ -1.19
RTF1-206ENST00000560447 NHLRC2Q8NBF2 726 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 ZNF502Q8TBZ5 544 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 C10orf105Q8TEF2 133 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 FAM168AQ92567 244 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 GNB4Q9HAV0 340 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 CLEC5AQ9NY25 188 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 NAGKQ9UJ70 344 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 PSG8Q9UQ74 426 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 MOB4Q9Y3A3 225 aa7.59□□□□□ -1.19
RTF1-206ENST00000560447 HRNRQ86YZ3 2850 aaPredicted RBP7.59□□□□□ -1.19
RTF1-206ENST00000560447 IGHV1-69DA0A0B4J2H0 117 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 GRIFINA4D1Z8 144 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 FAM223BA6NKX1 122 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 A8MWP6 167 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 H3BUA1 57 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 M0QZK8 103 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 IGHV1-69P01742 117 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 GPX1P07203 203 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 CTSGP08311 255 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 GATA3P23771 443 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 CD24P25063 80 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 DDTP30046 118 aa7.58□□□□□ -1.2
RTF1-206ENST00000560447 LINC00310P59036 64 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms