RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 ANKRD29Q8N6D5 301 aa4.27□□□□□ -1.73
CASC4-208ENST00000559151 MRPL30Q8TCC3 161 aaKnown RBP4.27□□□□□ -1.73
CASC4-208ENST00000559151 ULBP3Q9BZM4 244 aa4.27□□□□□ -1.73
CASC4-208ENST00000559151 COL4A6Q14031 1691 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 MALRD1Q5VYJ5 2156 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 COL11A1P12107 1806 aaPredicted RBP4.26□□□□□ -1.73
CASC4-208ENST00000559151 UQCRHLA0A096LP55 91 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 SMIM9A6NGZ8 99 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 TSTD3H0UI37 97 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 PFDN1O60925 122 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 C1QAP02745 245 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 C1QCP02747 245 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 UQCRHP07919 91 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 DEFA1P59665 94 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 RPS20P60866 119 aaKnown RBP4.26□□□□□ -1.73
CASC4-208ENST00000559151 WHAMMP3Q1A5X7 153 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 FAM27BQ5VT28 67 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 C4orf22Q6V702 233 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 Q6ZRN7 208 aaPredicted RBP4.26□□□□□ -1.73
CASC4-208ENST00000559151 PRTFDC1Q9NRG1 225 aa4.26□□□□□ -1.73
CASC4-208ENST00000559151 IBTKQ9P2D0 1353 aaPredicted RBP4.26□□□□□ -1.73
CASC4-208ENST00000559151 PQLC2LA1A4F0 135 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 TRAPPC2LH3BP13 241 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 NAPSAO96009 420 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 AADACL3Q5VUY0 350 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 TMEM42Q69YG0 159 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 RPL13AP3Q6NVV1 102 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 LPCAT3Q6P1A2 487 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 NUBP2Q9Y5Y2 271 aa4.25□□□□□ -1.73
CASC4-208ENST00000559151 ZFHX2Q9C0A1 2572 aaPredicted RBP4.25□□□□□ -1.73
CASC4-208ENST00000559151 MDC1Q14676 2089 aaKnown RBP4.25□□□□□ -1.73
CASC4-208ENST00000559151 DOCK3Q8IZD9 2030 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 FASNP49327 2511 aaKnown RBP4.24□□□□□ -1.73
CASC4-208ENST00000559151 PTPRBP23467 1997 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 VPS13AQ96RL7 3174 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 A0A087WUJ7 227 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 IGKV1D-43A0A0B4J1Z2 117 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 OR4C46A6NHA9 309 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 FABP5P3A8MUU1 101 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 ZNF737O75373 536 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 SERPINA7P05543 415 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 SLC36A1Q7Z2H8 476 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 PFDN5Q99471 154 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 TMEM138Q9NPI0 162 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 FBXL12Q9NXK8 326 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 GLTPQ9NZD2 209 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 GSKIPQ9P0R6 139 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 TP73-AS1Q9UF72 201 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 ASB4Q9Y574 426 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 PTPRZ1P23471 2315 aaPredicted RBP4.24□□□□□ -1.73
CASC4-208ENST00000559151 RTL9Q8NET4 1388 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 CPAMD8Q8IZJ3 1885 aa4.24□□□□□ -1.73
CASC4-208ENST00000559151 GREB1Q4ZG55 1949 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 TTRP02766 147 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 HBA1P69905 142 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 OR10K1Q8NGX5 313 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 DERL1Q9BUN8 251 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 OR52A1Q9UKL2 312 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 FBXO5Q9UKT4 447 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 ZNF292O60281 2723 aa4.23□□□□□ -1.73
CASC4-208ENST00000559151 A0A1B0GV90 55 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 SLC22A1O15245 554 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 CST2P09228 141 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 KISS1Q15726 138 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
CASC4-208ENST00000559151 OR13D1Q8NGV5 346 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 HSPB9Q9BQS6 159 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 KIFC1Q9BW19 673 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 C11orf68Q9H3H3 251 aaKnown RBP4.22□□□□□ -1.73
CASC4-208ENST00000559151 BOLA2Q9H3K6 86 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 TMEM56-RWDD3S4R434 201 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 DLG5Q8TDM6 1919 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 MAST2Q6P0Q8 1798 aa4.22□□□□□ -1.73
CASC4-208ENST00000559151 ANKRD11Q6UB99 2663 aaPredicted RBP4.21□□□□□ -1.73
CASC4-208ENST00000559151 A0A0G2JMZ2 1700 aa4.21□□□□□ -1.73
CASC4-208ENST00000559151 OR2B3O76000 313 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 IGKV1-5P01602 117 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 GPX1P07203 203 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BOP23527 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 S100PP25815 95 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BBP33778 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BDP58876 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 TAS2R41P59536 307 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BCP62807 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST2H2BEQ16778 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BHQ93079 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 ZHX1-C8orf76Q96EF9 292 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 C12orf57Q99622 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BNQ99877 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 HIST1H2BMQ99879 126 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 COMMD5Q9GZQ3 224 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 COL4A1P02462 1669 aa4.21□□□□□ -1.74
CASC4-208ENST00000559151 MAP1BP46821 2468 aaKnown RBP4.21□□□□□ -1.74
CASC4-208ENST00000559151 TPRP12270 2363 aaKnown RBP4.2□□□□□ -1.74
CASC4-208ENST00000559151 COL1A1P02452 1464 aaPredicted RBP4.2□□□□□ -1.74
CASC4-208ENST00000559151 FAM236DA0A1B0GTK5 79 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 IRGMA1A4Y4 181 aa4.2□□□□□ -1.74
CASC4-208ENST00000559151 OR51F1A6NGY5 319 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms