RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 MRPL51Q4U2R6 128 aaKnown RBP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LYRM7Q5U5X0 104 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 AADACL3Q5VUY0 350 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 FAM104BQ5XKR9 115 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LGALS9CQ6DKI2 356 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 CROCCP2Q86T23 111 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BHQ93079 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 L3HYPDHQ96EM0 354 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 ADAT3Q96EY9 351 aaPredicted RBP2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BNQ99877 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 HIST1H2BMQ99879 126 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 C1QTNF6Q9BXI9 259 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LINC00574Q9H8X3 128 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 POPDC3Q9HBV1 291 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 SNX12Q9UMY4 172 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 LINC00588Q9Y4M8 146 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 TRRAPQ9Y4A5 3859 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 C4AP0C0L4 1744 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 TOGARAM1Q9Y4F4 1720 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 FYCO1Q9BQS8 1478 aa2.19□□□□□ -2.06
LRRC28-212ENST00000558911 ANKRD31Q8N7Z5 1873 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 ARHGAP21Q5T5U3 1957 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 DOCK4Q8N1I0 1966 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 AGRNO00468 2067 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 TRDV1A0A1B0GX56 115 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 F8W036 122 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 UBE2L6O14933 153 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 LECT2O14960 151 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 CYB5BO43169 146 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 DBIP07108 87 aaKnown RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 CMPK1P30085 196 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 S100A11P31949 105 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 KLF3P57682 345 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 RPS28P62857 69 aaKnown RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 UBE2SQ16763 222 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 DNLZQ5SXM8 178 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 PRSS54Q6PEW0 395 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 SLC25A34Q6PIV7 304 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 AMTNQ6UX39 209 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 Q6ZR03 302 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 KRTAP5-5Q701N2 237 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 LCA10Q71F78 164 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 SPATA12Q7Z6I5 190 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 MIR7-3HGQ8N6C7 128 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 ZFAND2AQ8N6M9 145 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF433Q8N7K0 673 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 NUP35Q8NFH5 326 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 TSTD1Q8NFU3 115 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 OR13C4Q8NGS5 318 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 CANT1Q8WVQ1 401 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 BORCS8Q96FH0 119 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 C2orf50Q96LR7 162 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 CARD19Q96LW7 228 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 TM2D3Q9BRN9 247 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 C2orf88Q9BSF0 95 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 NKX6-2Q9C056 277 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 IMUPQ9GZP8 106 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 LHX9Q9NQ69 397 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 TNFRSF19Q9NS68 423 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 MED31Q9Y3C7 131 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 RBM7Q9Y580 266 aaKnown RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 ZSWIM8A7E2V4 1837 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 GBF1Q92538 1859 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 NUP214P35658 2090 aaPredicted RBP2.18□□□□□ -2.06
LRRC28-212ENST00000558911 DOCK8Q8NF50 2099 aa2.18□□□□□ -2.06
LRRC28-212ENST00000558911 TRPM2O94759 1503 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 DDX60LQ5H9U9 1706 aaKnown RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 A0A087WUU8 490 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 GGT3PA6NGU5 568 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 ATP6V1G2-DDX39BF2Z307 99 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 BUB1B-PAK6H3BSN5 160 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 GABARAPH6UMI1 98 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 DLEU1O43261 78 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 SLC25A20O43772 301 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 CDS2O95674 445 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 IFNA10P01566 189 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 MPC1LP0DKB6 136 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 CASP1P29466 404 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 CD200P41217 278 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 CSN1S1P47710 185 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 EVX1P49640 407 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 INSL3P51460 131 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 ZNF80P51504 273 aaPredicted RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 AKR1C2P52895 323 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 TSPEAR-AS2P59090 65 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 CCL20P78556 96 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 SLC38A11Q08AI6 406 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 OR8G1Q15617 311 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 C10orf91Q5T1B1 145 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 RPL22L1Q6P5R6 122 aaKnown RBP2.17□□□□□ -2.06
LRRC28-212ENST00000558911 SAXO1Q8IYX7 474 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 OR8I2Q8N0Y5 310 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 CYB561D1Q8N8Q1 229 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 TMEM229BQ8NBD8 167 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 OR5C1Q8NGR4 320 aa2.17□□□□□ -2.06
LRRC28-212ENST00000558911 DCANP1Q8TF63 244 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms