RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 BRI3O95415 125 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 IL4P05112 153 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 CLEC3BP05452 202 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 FABP1P07148 127 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 GPR183P32249 361 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 RPL23P62829 140 aaKnown RBP5.7□□□□□ -1.5
SPG11-204ENST00000557866 UBE2L3P68036 154 aaKnown RBP5.7□□□□□ -1.5
SPG11-204ENST00000557866 RHEBQ15382 184 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 TMEM95Q3KNT9 176 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 OR5R1Q8NH85 324 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 RNF125Q96EQ8 232 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 SMIM7Q9BQ49 75 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 ELOVL1Q9BW60 279 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 SMCO4Q9NRQ5 59 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 VPREB3Q9UKI3 123 aa5.7□□□□□ -1.5
SPG11-204ENST00000557866 CREBBPQ92793 2442 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 UNC79Q9P2D8 2635 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 TRBV20OR9-2A0A075B6H5 130 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 IGHV3-35A0A0C4DH35 117 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 COLCA2A8K830 154 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 H3BTX0 84 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 AP4M1O00189 453 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 HOXA3O43365 443 aaPredicted RBP5.69□□□□□ -1.5
SPG11-204ENST00000557866 TRGV3P03979 118 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 CRYBB3P26998 211 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 MYCNOSP40205 109 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 SUMO1P63165 101 aaKnown RBP5.69□□□□□ -1.5
SPG11-204ENST00000557866 ATP5G2Q06055 141 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 TMEM241Q24JQ0 296 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 TOMM20LQ6UXN7 152 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 CLEC19AQ6UXS0 136 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 ZNF600Q6ZNG1 722 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 ZNF329Q86UD4 541 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 SIGLECL1Q8N7X8 197 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 Q8WTZ3 238 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 EEF1AKMT3Q96AZ1 226 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 YPEL4Q96NS1 127 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 CDIP1Q9H305 208 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 ZNF586Q9NXT0 402 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 TMEM14CQ9P0S9 112 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 NAT8Q9UHE5 227 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 ZNF580Q9UK33 172 aa5.69□□□□□ -1.5
SPG11-204ENST00000557866 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
SPG11-204ENST00000557866 IGHV3OR16-8A0A075B7F1 116 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 A0A087WWC5 75 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 TRBV7-1A0A0A6YYK4 115 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 CLPSL1A2RUU4 121 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 ZNF98A6NK75 572 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 FAM223BA6NKX1 122 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 H3BUA1 57 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 TSPAN4O14817 238 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 TGOLN2O43493 480 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 CD5LO43866 347 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 TRBV12-3P01733 135 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 NBEAP1P0C6P0 100 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 PNRC1Q12796 327 aaPredicted RBP5.68□□□□□ -1.5
SPG11-204ENST00000557866 ADIRFQ15847 76 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 C10orf99Q6UWK7 81 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 FAM223AQ8IWN6 122 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 STXBP6Q8NFX7 210 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 C2CD4CQ8TF44 421 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 BLNKQ8WV28 456 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 ISOC2Q96AB3 205 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 C17orf77Q96MU5 243 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 DUX5Q96PT3 197 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 TUBA4BQ9H853 241 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 ZNF702PQ9H963 129 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 AURKAIP1Q9NWT8 199 aaPredicted RBP5.68□□□□□ -1.5
SPG11-204ENST00000557866 CCDC168Q8NDH2 2452 aa5.68□□□□□ -1.5
SPG11-204ENST00000557866 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.67□□□□□ -1.5
SPG11-204ENST00000557866 PGPEP1LA6NFU8 196 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 PPP5D1E7EU14 171 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 IGLC2P0DOY2 106 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 HIST1H1EP10412 219 aaKnown RBP5.67□□□□□ -1.5
SPG11-204ENST00000557866 RPL35P42766 123 aaKnown RBP5.67□□□□□ -1.5
SPG11-204ENST00000557866 TPPP2P59282 170 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 RANP62826 216 aaKnown RBP5.67□□□□□ -1.5
SPG11-204ENST00000557866 GNG5P63218 68 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 RNF212Q495C1 297 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 LINC01551Q86U37 167 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 HIST1H2BAQ96A08 127 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 USMG5Q96IX5 58 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 LINC00479Q96M42 142 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 ATP6V0BQ99437 205 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 SMAD5-AS1Q9Y6J3 95 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 ITPR3Q14573 2671 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 GCN1Q92616 2671 aaKnown RBP5.67□□□□□ -1.5
SPG11-204ENST00000557866 ITPR2Q14571 2701 aa5.67□□□□□ -1.5
SPG11-204ENST00000557866 TRBV19A0A075B6N1 114 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 TRAV34A0A0B4J273 112 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 PGPA6NDG6 321 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 B4DEV8 164 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 K7EN84 100 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 PEX7O00628 323 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 IGHV3-11P01762 117 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 IGHG4P01861 327 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 APOHP02749 345 aaPredicted RBP5.66□□□□□ -1.5
SPG11-204ENST00000557866 PF4V1P10720 104 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 PSMB8P28062 276 aa5.66□□□□□ -1.5
SPG11-204ENST00000557866 RAB9AP51151 201 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms