RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 CRYGBP07316 175 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 IGLC1P0CG04 106 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM155Q4W5P6 130 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 BPIFA4PQ86YQ2 179 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 TMEM75Q8N9X5 138 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 OR10AG1Q8NH19 301 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 PRSS3P2Q8NHM4 247 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 ZC2HC1AQ96GY0 325 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 SIGLEC9Q9Y336 463 aa9.4□□□□□ -0.9
VIPAS39-211ENST00000557658 K7EQM0 130 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 OVOL3O00110 214 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 TNFRSF13BO14836 293 aaPredicted RBP9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 PSG9Q00887 426 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 OCIAD2Q56VL3 154 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 RASL11BQ9BPW5 248 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 TMEM133Q9H2Q1 129 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 CTSZQ9UBR2 303 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 PEF1Q9UBV8 284 aaKnown RBP9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 RNF24Q9Y225 148 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 CNTFRP26992 372 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 Q6AWC8 147 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 WFDC8Q8IUA0 241 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 SCNM1Q9BWG6 230 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 MUC3AQ02505 3323 aa9.39□□□□□ -0.91
VIPAS39-211ENST00000557658 RBP4P02753 201 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 RBPJQ06330 500 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 Q71RC1 249 aaPredicted RBP9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 NGBQ9NPG2 151 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 TEX22C9J3V5 150 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 SEC11AP67812 179 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 C2orf91Q6ZV80 131 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 PPP1R27Q86WC6 154 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 TNFRSF14Q92956 283 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 PSG8Q9UQ74 426 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
VIPAS39-211ENST00000557658 ABCA1O95477 2261 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 TRBV19A0A075B6N1 114 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 DPF1Q92782 380 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 KAAG1Q9UBP8 84 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 MALRD1Q5VYJ5 2156 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 RP1L1Q8IWN7 2480 aaPredicted RBP9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 C7orf71A4D174 169 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 I3L2K1 104 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 TMEM97Q5BJF2 176 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 IGFL3Q6UXB1 125 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 LYPD1Q8N2G4 141 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 TPPP3Q9BW30 176 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 INSIG2Q9Y5U4 225 aa9.37□□□□□ -0.91
VIPAS39-211ENST00000557658 TRAV8-6A0A0B4J262 113 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 C16orf97H3BN30 126 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 NCR2O95944 276 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 FTH1P19P0C7X4 201 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 PSG3Q16557 428 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 SHANK2-AS3Q9BTD1 123 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 ROS1P08922 2347 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 VSTM5A8MXK1 200 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 BSPH1Q075Z2 132 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 FAM57AQ8TBR7 257 aa9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 SPENQ96T58 3664 aaKnown RBP9.36□□□□□ -0.91
VIPAS39-211ENST00000557658 IGHV1-3A0A0C4DH29 117 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 GAGE12BA1L429 117 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 H3BRN7 92 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 SNAI2O43623 268 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 CT45A10P0DMU9 189 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 SIGLEC15Q6ZMC9 328 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 Q6ZS92 163 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 PIP4P1Q86T03 277 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 DEFB124Q8NES8 71 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 OR8A1Q8NGG7 326 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 OR1N2Q8NGR9 330 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 FBXL15Q9H469 300 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 SPAARA0A1B0GVQ0 90 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 K7ERU9 68 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 DEFB123Q8N688 67 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 ASCL2Q99929 193 aa9.35□□□□□ -0.91
VIPAS39-211ENST00000557658 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 K7EM74 188 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 IGLV1-47P01700 117 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 CRIP1P50238 77 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 NHLH1Q02575 133 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 CUL9Q8IWT3 2517 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 PRSS33Q8NF86 280 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 AP1S3Q96PC3 154 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 A6NDN8 102 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 D6R8Y8 96 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 FGF6P10767 208 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 PLGLAQ15195 96 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 LGALS9BQ3B8N2 356 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 LGALS9CQ6DKI2 356 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 RNASE6Q93091 150 aaKnown RBP9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 PRELID3AQ96N28 172 aa9.34□□□□□ -0.91
VIPAS39-211ENST00000557658 SRSF8Q9BRL6 282 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms