RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 SCXQ7RTU7 201 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 LHFPL1Q86WI0 220 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 CTAGE3PQ8IX95 158 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 OR4S1Q8NGB4 309 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 SGMS2Q8NHU3 365 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BHQ93079 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BNQ99877 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 HIST1H2BMQ99879 126 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TM2D3Q9BRN9 247 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TCEAL2Q9H3H9 227 aaPredicted RBP1.85□□□□□ -2.11
TRAV28-201ENST00000557548 CST9LQ9H4G1 147 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 EFCAB1Q9HAE3 211 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF286AQ9HBT8 521 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 NAT8Q9UHE5 227 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TNFSF18Q9UNG2 199 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 BAIAP2Q9UQB8 552 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 TRAPPC1Q9Y5R8 145 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 SOX21Q9Y651 276 aaPredicted RBP1.85□□□□□ -2.11
TRAV28-201ENST00000557548 ATP7BP35670 1465 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 RALGAPA2Q2PPJ7 1873 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 FER1L6Q2WGJ9 1857 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 NUP210LQ5VU65 1888 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 DLC1Q96QB1 1528 aa1.85□□□□□ -2.11
TRAV28-201ENST00000557548 MYO10Q9HD67 2058 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 IGHV3OR15-7A0A075B7D8 119 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TRAV41A0A0B4J266 112 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 A0A0B4J2C4 111 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TRBV7-6A0A0J9YX20 115 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TMEM218A2RU14 115 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 H3BMM0 161 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TAX1BP3O14907 124 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 ZNF73O43830 326 aaPredicted RBP1.84□□□□□ -2.11
TRAV28-201ENST00000557548 LYZL6O75951 148 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 CST7O76096 145 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 S100A4P26447 101 aaKnown RBP1.84□□□□□ -2.11
TRAV28-201ENST00000557548 FKBP2P26885 142 aaKnown RBP1.84□□□□□ -2.11
TRAV28-201ENST00000557548 SDC2P34741 201 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 RAB5CP51148 216 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 LINC00315P59091 139 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 FGF12P61328 243 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 BSPH1Q075Z2 132 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 RRN3P1Q2M238 152 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 C1orf140Q5VVS0 124 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 AMMECR1LQ6DCA0 310 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 LCA10Q71F78 164 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 MSRB3Q8IXL7 192 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 H1FOOQ8IZA3 346 aaPredicted RBP1.84□□□□□ -2.11
TRAV28-201ENST00000557548 OR5A2Q8NGI9 324 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 OR2T10Q8NGZ9 312 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 OR4K13Q8NH42 304 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 PPTC7Q8NI37 304 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 H1FXQ92522 213 aaKnown RBP1.84□□□□□ -2.11
TRAV28-201ENST00000557548 UBE2WQ96B02 151 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TEX37Q96LM6 180 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 CARD19Q96LW7 228 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 MGLLQ99685 303 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 SCRT1Q9BWW7 348 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 C1QTNF6Q9BXI9 259 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TUBA4BQ9H853 241 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 PHLDA3Q9Y5J5 127 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 SLIT3O75094 1523 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 NFAT5O94916 1531 aa1.84□□□□□ -2.11
TRAV28-201ENST00000557548 TRPM7Q96QT4 1865 aa1.84□□□□□ -2.12
TRAV28-201ENST00000557548 HFM1A2PYH4 1435 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 BLMP54132 1417 aaPredicted RBP1.83□□□□□ -2.12
TRAV28-201ENST00000557548 OTOFQ9HC10 1997 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 NUP98P52948 1817 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 ATAD5Q96QE3 1844 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 LOC107984640A0A0U1RRK4 108 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 GGT3PA6NGU5 568 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 TMEM212A6NML5 194 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 IFITM5A6NNB3 132 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 BBIP1A8MTZ0 92 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 C1orf196B1AJZ1 125 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 GGTLC3B5MD39 225 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 C9JCJ5 164 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 I3L521 148 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 NPFFO15130 113 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 IGKV1-5P01602 117 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 MT-ND4LP03901 98 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 INAFM2P0DMQ5 153 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF32P17041 273 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 LGALS3P17931 250 aaKnown RBP1.83□□□□□ -2.12
TRAV28-201ENST00000557548 AKR1C2P52895 323 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 TMBIM6P55061 237 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 RBM11P57052 281 aaKnown RBP1.83□□□□□ -2.12
TRAV28-201ENST00000557548 KRTAP10-8P60410 259 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 CCL20P78556 96 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF181Q2M3W8 571 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 Q5XG85 94 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 GLIPR1L1Q6UWM5 242 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 TMEM14EPQ6UXP3 125 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 GTF2H5Q6ZYL4 71 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 SSX8Q7RTT4 187 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 TRAPPC6BQ86SZ2 158 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 GPHB5Q86YW7 130 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.83□□□□□ -2.12
TRAV28-201ENST00000557548 SFT2D1Q8WV19 159 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 HIST1H2BAQ96A08 127 aa1.83□□□□□ -2.12
TRAV28-201ENST00000557548 NKX6-2Q9C056 277 aaPredicted RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms