RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RUSC1-AS1Q66K80 236 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 LHFPL4Q7Z7J7 247 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 BPIFA4PQ86YQ2 179 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 MUC15Q8N387 334 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 OR4F17Q8NGA8 305 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 CHCHD1Q96BP2 118 aaKnown RBP5.57□□□□□ -1.52
TDP1-213ENST00000555880 PGLYRP4Q96LB8 373 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 WNT10AQ9GZT5 417 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 RAXQ9Y2V3 346 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 C19orf71A6NCJ1 209 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 I3L2K1 104 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 CEACAM3P40198 252 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 GAGE1Q13065 139 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 Q56UQ5 140 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 CYB5R2Q6BCY4 276 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 GOLT1AQ6ZVE7 132 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 PRNTQ86SH4 94 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 TMEM208Q9BTX3 173 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 TMEM70Q9BUB7 260 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 GSX1Q9H4S2 264 aaPredicted RBP5.56□□□□□ -1.52
TDP1-213ENST00000555880 LPAR2Q9HBW0 351 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 SPTBN2O15020 2390 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 TRAV9-2A0A087WT02 112 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 TRBV6-1A0A0K0K1D8 114 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 LYNX1G3V0Z9 82 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 LYNX1P0DP58 116 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 HTR1DP28221 377 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 PRB3Q04118 309 aaPredicted RBP5.56□□□□□ -1.52
TDP1-213ENST00000555880 PRR30Q53SZ7 412 aaPredicted RBP5.56□□□□□ -1.52
TDP1-213ENST00000555880 LCN12Q6JVE5 192 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 LYPD1Q8N2G4 141 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 GTSF1Q8WW33 167 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 TIMD4Q96H15 378 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 SHANK2-AS3Q9BTD1 123 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 RAB1BQ9H0U4 201 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 ZFP30Q9Y2G7 519 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 GOLT1BQ9Y3E0 138 aa5.56□□□□□ -1.52
TDP1-213ENST00000555880 KALRNO60229 2985 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 ABCA1O95477 2261 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 SPTA1P02549 2419 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 LOC102724200A0A096LPH7 203 aaPredicted RBP5.55□□□□□ -1.52
TDP1-213ENST00000555880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.55□□□□□ -1.52
TDP1-213ENST00000555880 A0A1B0GW15 77 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 A6NNC1 897 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 VWC2LB2RUY7 222 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 TIMM23O14925 209 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 NBR2O15453 112 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 DLEU1O43261 78 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 TOX4O94842 621 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 FOXA3P55318 350 aaPredicted RBP5.55□□□□□ -1.52
TDP1-213ENST00000555880 DLX1P56177 255 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 KLRB1Q12918 225 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 LINC00322Q6ZN03 302 aaPredicted RBP5.55□□□□□ -1.52
TDP1-213ENST00000555880 EXOC3-AS1Q8N2X6 119 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 TMEM75Q8N9X5 138 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 DPM3Q9P2X0 92 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 LAMTOR2Q9Y2Q5 125 aa5.55□□□□□ -1.52
TDP1-213ENST00000555880 TRBV19A0A075B6N1 114 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 TRAV30A0A087WSZ9 112 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 TRAV8-1A0A0A6YYK1 113 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 A0A1B0GUT8 65 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 FAM90A27PA6NNH2 459 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 HSBP1L1C9JCN9 74 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 NPIPB6E9PJ23 425 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 LY6LH3BQJ8 138 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 H3BRN7 92 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 SCGB2A1O75556 95 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 LEPROTL1O95214 131 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 IGKV1-17P01599 117 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 HLA-DRB1P01911 266 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 CT45A10P0DMU9 189 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 RIGQ13278 110 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 ZNF672Q499Z4 452 aaPredicted RBP5.54□□□□□ -1.52
TDP1-213ENST00000555880 Q6AWC8 147 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 EBLN2Q6P2I7 272 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 CIARTQ8N365 385 aaPredicted RBP5.54□□□□□ -1.52
TDP1-213ENST00000555880 LINC01560Q8TB33 94 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 WFDC12Q8WWY7 111 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 RNF125Q96EQ8 232 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 NDFIP1Q9BT67 221 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 AAMDCQ9H7C9 122 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 MRPS16Q9Y3D3 137 aaKnown RBP5.54□□□□□ -1.52
TDP1-213ENST00000555880 PIEZO1Q92508 2521 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 ATMQ13315 3056 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 IGHV1-24A0A0C4DH33 117 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 C2orf70A6NJV1 201 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 K7EIM0 57 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 GNG7O60262 68 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 IGLV2-11P01706 119 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 IL4P05112 153 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 LINC00614P0C842 121 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 TSPOP30536 169 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 HES1Q14469 280 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 OR11H6Q8NGC7 330 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 PSMG3-AS1Q96PY0 264 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 CLEC5AQ9NY25 188 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 HSPB8Q9UJY1 196 aa5.54□□□□□ -1.52
TDP1-213ENST00000555880 HILPDAQ9Y5L2 63 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms