RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ARL14EPLP0DKL9 152 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 PAFAH1B2P68402 229 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 TM4SF20Q53R12 229 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 LCN15Q6UWW0 184 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 SIGLEC15Q6ZMC9 328 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 IL34Q6ZMJ4 242 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 DLX4Q92988 240 aaPredicted RBP8.56□□□□□ -1.04
SHMT2-220ENST00000555634 PAXXQ9BUH6 204 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 RHPN1-AS1Q9BWJ2 59 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 VSIRQ9H7M9 311 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 SEPSECSQ9HD40 501 aaKnown RBP8.56□□□□□ -1.04
SHMT2-220ENST00000555634 TMEM213A2RRL7 107 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 ZNF785A8K8V0 405 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 SAP30O75446 220 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 STAG3L2P0CL84 134 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 STAG3L3P0CL85 134 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 CBLN1P23435 193 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
SHMT2-220ENST00000555634 PSMB3P49720 205 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 RBPMS2Q6ZRY4 209 aaKnown RBP8.55□□□□□ -1.04
SHMT2-220ENST00000555634 MIR17HGQ75NE6 70 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 RPP25LQ8N5L8 163 aaKnown RBP8.55□□□□□ -1.04
SHMT2-220ENST00000555634 OR51M1Q9H341 326 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 MANBALQ9NQG1 85 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 SMPXQ9UHP9 88 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 RFNGQ9Y644 331 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 WNK1Q9H4A3 2382 aa8.55□□□□□ -1.04
SHMT2-220ENST00000555634 IGHV3-49A0A0A0MS15 119 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 IGHV3-66A0A0C4DH42 116 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 RGS13O14921 159 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 HMGB3O15347 200 aaKnown RBP8.54□□□□□ -1.04
SHMT2-220ENST00000555634 BUB3O43684 328 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 FOLR2P14207 255 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 INSL3P51460 131 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 LEMD1Q68G75 181 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 HIST2H2BDQ6DRA6 164 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 LCN12Q6JVE5 192 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 PATE2Q6UY27 113 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 SLC25A2Q9BXI2 301 aa8.54□□□□□ -1.04
SHMT2-220ENST00000555634 IGHV3OR16-13A0A075B7E8 117 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 IGHV3-74A0A0B4J1X5 117 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 A0A1B0GV50 99 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 DNASE2O00115 360 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-220ENST00000555634 CHEK1O14757 476 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 GCHFRP30047 84 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 FHITP49789 147 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 FGF8P55075 233 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-220ENST00000555634 PSG9Q00887 426 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 PDE6HQ13956 83 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 C9orf66Q5T8R8 295 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 C16orf54Q6UWD8 224 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 TCF24Q7RTU0 167 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 LINC00482Q8N8I6 264 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 OR2K2Q8NGT1 345 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 MBD3L1Q8WWY6 194 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 SLC50A1Q9BRV3 221 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 NKX6-2Q9C056 277 aaPredicted RBP8.53□□□□□ -1.04
SHMT2-220ENST00000555634 HRH4Q9H3N8 390 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 SIGLEC8Q9NYZ4 499 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 ARL2-SNX15V9GYD0 113 aa8.53□□□□□ -1.04
SHMT2-220ENST00000555634 TRAV1-1A0A0B4J248 108 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 OR10J4P0C629 311 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 HIST1H1EP10412 219 aaKnown RBP8.52□□□□□ -1.05
SHMT2-220ENST00000555634 GP9P14770 177 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 ID1P41134 155 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 CLLU1Q5K131 121 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 SPATA31B1PQ5VZV4 182 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 GLMPQ8WWB7 406 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 NRN1Q9NPD7 142 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 CLEC5AQ9NY25 188 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 GNG13Q9P2W3 67 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 ZMAT5Q9UDW3 170 aaKnown RBP8.52□□□□□ -1.05
SHMT2-220ENST00000555634 U3KQE9 123 aa8.52□□□□□ -1.05
SHMT2-220ENST00000555634 A0A087X0K7 114 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 TRAV25A0A0B4J276 109 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 OR4C46A6NHA9 309 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 ZNF253O75346 499 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 CSN3P07498 182 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 PYYP10082 97 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 SNRPD3P62318 126 aaKnown RBP8.51□□□□□ -1.05
SHMT2-220ENST00000555634 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 MORN5Q5VZ52 161 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 CMTM2Q8TAZ6 248 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 BLNKQ8WV28 456 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 NBEAL1Q6ZS30 2694 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 TENM1Q9UKZ4 2725 aa8.51□□□□□ -1.05
SHMT2-220ENST00000555634 TRAV5A0A0B4J249 113 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 K7EQM0 130 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 APOHP02749 345 aaPredicted RBP8.5□□□□□ -1.05
SHMT2-220ENST00000555634 NMBP08949 121 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 NBEAP1P0C6P0 100 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 CSN1S1P47710 185 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 IFITM2Q01629 132 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 PRR31Q5SQ13 230 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 CST9LP1Q5W188 147 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 LYPD1Q8N2G4 141 aa8.5□□□□□ -1.05
SHMT2-220ENST00000555634 C16orf92Q96LL3 132 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms