RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 OR8B8Q15620 311 aa2.78□□□□□ -1.96
SCFD1-208ENST00000553278 RNASE10Q5GAN6 216 aaKnown RBP2.78□□□□□ -1.96
SCFD1-208ENST00000553278 RASL12Q9NYN1 266 aa2.78□□□□□ -1.96
SCFD1-208ENST00000553278 ADGRB3O60242 1522 aa2.78□□□□□ -1.97
SCFD1-208ENST00000553278 IGHV1-58A0A0C4DH39 117 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 UBL3O95164 117 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 HMGN1P05114 100 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 PSG9Q00887 426 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 PATE2Q6UY27 113 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 SPACA4Q8TDM5 124 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 BORCS5Q969J3 196 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 LY96Q9Y6Y9 160 aa2.77□□□□□ -1.97
SCFD1-208ENST00000553278 PIK3C2AO00443 1686 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 DBIP07108 87 aaKnown RBP2.76□□□□□ -1.97
SCFD1-208ENST00000553278 ASAH2BP0C7U1 165 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 KRTAP10-10P60014 251 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 KLRD1Q13241 179 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 OR8I2Q8N0Y5 310 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 TMEM138Q9NPI0 162 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 TAF1LQ8IZX4 1826 aa2.76□□□□□ -1.97
SCFD1-208ENST00000553278 GLI3P10071 1580 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 STRCQ7RTU9 1775 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 DISP1Q96F81 1524 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 AKR1C3P42330 323 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 SSR2P43308 183 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 Q1T7F1 81 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 VMA21Q3ZAQ7 101 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 LINC00305Q7Z4B0 112 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 Q8IYB0 196 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 ZC2HC1AQ96GY0 325 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
SCFD1-208ENST00000553278 COL4A4P53420 1690 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-208ENST00000553278 N4BP2Q86UW6 1770 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-208ENST00000553278 TRBV7-6A0A0J9YX20 115 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 TMEM189A5PLL7 270 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 F8W036 122 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 OR1I1O60431 355 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 LINC00311Q8N616 119 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 OR2T35Q8NGX2 323 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 CHCHD1Q96BP2 118 aaKnown RBP2.74□□□□□ -1.97
SCFD1-208ENST00000553278 MCEEQ96PE7 176 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 RETNLBQ9BQ08 111 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 MYH10P35580 1976 aa2.74□□□□□ -1.97
SCFD1-208ENST00000553278 ICE1Q9Y2F5 2266 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 CEP152O94986 1710 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 A2MP01023 1474 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 C17orf112F2Z3M2 114 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 CRPP02741 224 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 MT-ND6P03923 174 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 GPX2P18283 190 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 C4orf22Q6V702 233 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 RPS19BP1Q86WX3 136 aaKnown RBP2.73□□□□□ -1.97
SCFD1-208ENST00000553278 RNASE11Q8TAA1 199 aaKnown RBP2.73□□□□□ -1.97
SCFD1-208ENST00000553278 RTL9Q8NET4 1388 aa2.73□□□□□ -1.97
SCFD1-208ENST00000553278 TRPM1Q7Z4N2 1603 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 OVOS2A0A0G2JMS6 1433 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 M0QZK8 103 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 DPM2O94777 84 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 CMPK1P30085 196 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 RAB5CP51148 216 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 PLXNA3P51805 1871 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 CKS1BP61024 79 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 FAM216BQ8N7L0 139 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 OR4B1Q8NGF8 309 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 OR5H6Q8NGV6 325 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 TMEM106BQ9NUM4 274 aa2.72□□□□□ -1.97
SCFD1-208ENST00000553278 XIRP1Q702N8 1843 aaKnown RBP2.72□□□□□ -1.97
SCFD1-208ENST00000553278 MDC1Q14676 2089 aaKnown RBP2.72□□□□□ -1.97
SCFD1-208ENST00000553278 ANKRD31Q8N7Z5 1873 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 CACNA1GO43497 2377 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 RTTNQ86VV8 2226 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 TRAV14DV4A0A0A6YYC5 116 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 TRAV13-1A0A0B4J241 112 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 LOC107984640A0A0U1RRK4 108 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 LYRM1O43325 122 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 SCTP09683 121 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 SRP9P49458 86 aaKnown RBP2.71□□□□□ -1.98
SCFD1-208ENST00000553278 TEX29Q8N6K0 151 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 TMEM254Q8TBM7 123 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 SFT2D1Q8WV19 159 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 FAM107BQ9H098 131 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 OR5AC2Q9NZP5 309 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 RP1P56715 2156 aa2.71□□□□□ -1.98
SCFD1-208ENST00000553278 TRAV12-1A0A0B4J245 112 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 H3BMG7 143 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 TNFSF15O95150 251 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 SDC4P31431 198 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 ROMO1P60602 79 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 TCTE3Q8IZS6 198 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 POP5Q969H6 163 aaKnown RBP2.7□□□□□ -1.98
SCFD1-208ENST00000553278 TCEAL4Q96EI5 215 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 PRELID3AQ96N28 172 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 CBLN4Q9NTU7 201 aa2.7□□□□□ -1.98
SCFD1-208ENST00000553278 MYO5AQ9Y4I1 1855 aaKnown RBP2.7□□□□□ -1.98
SCFD1-208ENST00000553278 BRWD1Q9NSI6 2320 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 OR2T8A6NH00 312 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 C2orf70A6NJV1 201 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 C9JAW5 83 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 M0R233 179 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms