RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 IGKV1-17P01599 117 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 RPL35AP18077 110 aaKnown RBP6.36□□□□□ -1.39
CHPT1-208ENST00000552215 HOXD3P31249 432 aaPredicted RBP6.36□□□□□ -1.39
CHPT1-208ENST00000552215 CNN1P51911 297 aaKnown RBP6.36□□□□□ -1.39
CHPT1-208ENST00000552215 KRTAP1-3Q8IUG1 177 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 MEGF9Q9H1U4 602 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 TRAV30A0A087WSZ9 112 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 FAM90A9PA6NNJ1 464 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 ORM1P02763 201 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 IGLC1P0CG04 106 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 S100A1P23297 94 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 PAFAH1B2P68402 229 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 DEFB121Q5J5C9 76 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 IGKV2-40A0A087WW87 121 aaPredicted RBP6.36□□□□□ -1.39
CHPT1-208ENST00000552215 IGKV2D-40P01614 121 aaPredicted RBP6.36□□□□□ -1.39
CHPT1-208ENST00000552215 PQLC2Q6ZP29 291 aa6.36□□□□□ -1.39
CHPT1-208ENST00000552215 K7EQM0 130 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 NDUFA3O95167 84 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 IGHG2P01859 326 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 CT45A10P0DMU9 189 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 PPIFP30405 207 aaKnown RBP6.35□□□□□ -1.39
CHPT1-208ENST00000552215 KHDC3LQ587J8 217 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 DEFB104AQ8WTQ1 72 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 PHYHIPLQ96FC7 376 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 PLA2G2EQ9NZK7 142 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 HELTA6NFD8 242 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 CTSGP08311 255 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 GNG4P50150 75 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 TCTEX1D4Q5JR98 221 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 BAGE2Q86Y30 109 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 LINC01006Q8NI28 216 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 NBEAL2Q6ZNJ1 2754 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 A0A1W2PPQ1 181 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 TSPAN9O75954 239 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 BCL2P10415 239 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 C11orf91Q3C1V1 193 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 BSXQ3C1V8 233 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 GAR1Q9NY12 217 aaKnown RBP6.35□□□□□ -1.39
CHPT1-208ENST00000552215 DMRT1Q9Y5R6 373 aa6.35□□□□□ -1.39
CHPT1-208ENST00000552215 I3L2K1 104 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 SPRY2O43597 315 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 FSTL3O95633 263 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 P0C879 139 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 LYL1P12980 280 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 RPL7P18124 248 aaKnown RBP6.34□□□□□ -1.39
CHPT1-208ENST00000552215 S100A4P26447 101 aaKnown RBP6.34□□□□□ -1.39
CHPT1-208ENST00000552215 ADMP35318 185 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 RNF2Q99496 336 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 CCL24O00175 119 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 RPL29P47914 159 aaKnown RBP6.34□□□□□ -1.39
CHPT1-208ENST00000552215 RIPPLY3P57055 190 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 MEF2BQ02080 365 aaPredicted RBP6.34□□□□□ -1.39
CHPT1-208ENST00000552215 ERCC8Q13216 396 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 TTC9CQ8N5M4 171 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 TMEM116Q8NCL8 245 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 Q9H3A6 140 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 IGLV11-55A0A075B6I3 123 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 ELOA3CA0A087WX78 387 aaPredicted RBP6.34□□□□□ -1.39
CHPT1-208ENST00000552215 SERTM2A0A1B0GWG4 89 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 EGR2P11161 476 aaPredicted RBP6.34□□□□□ -1.39
CHPT1-208ENST00000552215 CAMPP49913 170 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 ZNF726P1Q15940 193 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 ACTL10Q5JWF8 245 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 UBE2E2Q96LR5 201 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 SLC35B3Q9H1N7 401 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 TMEM167BQ9NRX6 74 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 VAX2Q9UIW0 290 aa6.34□□□□□ -1.39
CHPT1-208ENST00000552215 A0A1W2PS18 150 aa6.34□□□□□ -1.4
CHPT1-208ENST00000552215 MRAPQ8TCY5 172 aa6.34□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF702PQ9H963 129 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 TRBV7-1A0A0A6YYK4 115 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 GRIFINA4D1Z8 144 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF705GA8MUZ8 300 aaPredicted RBP6.33□□□□□ -1.4
CHPT1-208ENST00000552215 CA1P00915 261 aaPredicted RBP6.33□□□□□ -1.4
CHPT1-208ENST00000552215 RPS10P46783 165 aaKnown RBP6.33□□□□□ -1.4
CHPT1-208ENST00000552215 CBLN2Q8IUK8 224 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 ZFP82Q8N141 532 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF491Q8N8L2 437 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 NPIPB5A8MRT5 1133 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 CRYGBP07316 175 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 SIGLEC15Q6ZMC9 328 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 CCDC140Q96MF4 163 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 GGACTQ9BVM4 153 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 TUBA4BQ9H853 241 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 YTHDF2Q9Y5A9 579 aaKnown RBP6.33□□□□□ -1.4
CHPT1-208ENST00000552215 AGRNO00468 2067 aa6.33□□□□□ -1.4
CHPT1-208ENST00000552215 A0A096LNT2 108 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 SEC14L6B5MCN3 397 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 C9JQL5 133 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 H3BQ15 152 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 H7BYZ3 331 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 ZP3P21754 424 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 S100A7P31151 101 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 APRG1Q8IVJ8 170 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 CCDC28AQ8IWP9 274 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
CHPT1-208ENST00000552215 PSMG3Q9BT73 122 aaPredicted RBP6.32□□□□□ -1.4
CHPT1-208ENST00000552215 FOLR2P14207 255 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 FAM3BP58499 235 aaPredicted RBP6.32□□□□□ -1.4
CHPT1-208ENST00000552215 DEFB131AP59861 70 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms