RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 J3QLI3 93 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 GATCO43716 136 aaKnown RBP8.93□□□□□ -0.98
RAB5C-208ENST00000551338 LTAP01374 205 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 IGLV2-11P01706 119 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 IGHG2P01859 326 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 S100A8P05109 93 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 CDX1P47902 265 aaPredicted RBP8.93□□□□□ -0.98
RAB5C-208ENST00000551338 DEFB113Q30KQ7 82 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 C9orf152Q5JTZ5 239 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 GFI1BQ5VTD9 330 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 TOMM20LQ6UXN7 152 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 CLEC19AQ6UXS0 136 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 Q71RC1 249 aaPredicted RBP8.93□□□□□ -0.98
RAB5C-208ENST00000551338 S100A7AQ86SG5 101 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 OR8I2Q8N0Y5 310 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 HIST3H2BBQ8N257 126 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 LYPD1Q8N2G4 141 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 MAPK1IP1LQ8NDC0 245 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 GPR82Q96P67 336 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 MS4A10Q96PG2 267 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 MLST8Q9BVC4 326 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 RABAC1Q9UI14 185 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 LINC00527Q9UJ94 153 aa8.93□□□□□ -0.98
RAB5C-208ENST00000551338 PRRC2AP48634 2157 aaKnown RBP8.93□□□□□ -0.98
RAB5C-208ENST00000551338 SMIM27A0A1W2PRY6 76 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 ZNF705GA8MUZ8 300 aaPredicted RBP8.92□□□□□ -0.98
RAB5C-208ENST00000551338 RNF223E7ERA6 249 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 FSHBP01225 129 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 IGF1P05019 195 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 IGHV4-31P0DP07 118 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 MEOX2P50222 304 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 PDE6HQ13956 83 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 GOLT1AQ6ZVE7 132 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 NUDT11Q96G61 164 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 GAR1Q9NY12 217 aaKnown RBP8.92□□□□□ -0.98
RAB5C-208ENST00000551338 ZNF492Q9P255 531 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 TRAPPC1Q9Y5R8 145 aa8.92□□□□□ -0.98
RAB5C-208ENST00000551338 TRAV8-1A0A0A6YYK1 113 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 TRBV7-1A0A0A6YYK4 115 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 IGHV3-35A0A0C4DH35 117 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 FAM223BA6NKX1 122 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 M0QZK8 103 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 BMPR1BO00238 502 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 FRMD6-AS1P0C7T7 363 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 RPL7P18124 248 aaKnown RBP8.91□□□□□ -0.98
RAB5C-208ENST00000551338 CBLN1P23435 193 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 PPIFP30405 207 aaKnown RBP8.91□□□□□ -0.98
RAB5C-208ENST00000551338 TCL1AP56279 114 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 ATP5G2Q06055 141 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 DEFB112Q30KQ8 113 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 COA6Q5JTJ3 125 aaKnown RBP8.91□□□□□ -0.98
RAB5C-208ENST00000551338 Q5PR19 223 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 PRR27Q6MZM9 219 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 LINC00322Q6ZN03 302 aaPredicted RBP8.91□□□□□ -0.98
RAB5C-208ENST00000551338 Q6ZS46 218 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 KRTAP1-3Q8IUG1 177 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 FAM223AQ8IWN6 122 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 CMTM2Q8TAZ6 248 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 GRAMD2BQ96HH9 432 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 ATP6V0BQ99437 205 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 PITPNC1Q9UKF7 332 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 SMAD5-AS1Q9Y6J3 95 aa8.91□□□□□ -0.98
RAB5C-208ENST00000551338 IGHV3OR16-8A0A075B7F1 116 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 CLPSL1A2RUU4 121 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 C19orf71A6NCJ1 209 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 H3BUA1 57 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 M0R3E3 92 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 BRI3O95415 125 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.98
RAB5C-208ENST00000551338 TGFAP01135 160 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 TRGV3P03979 118 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 CLEC3BP05452 202 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 SMIM6P0DI80 62 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 TMEM183AQ8IXX5 376 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 TMEM75Q8N9X5 138 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 C12orf57Q99622 126 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 GPR61Q9BZJ8 451 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 GNB4Q9HAV0 340 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 SERTAD4Q9NUC0 356 aa8.9□□□□□ -0.98
RAB5C-208ENST00000551338 A0A087X0K7 114 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 DIRC3C9JPN6 131 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 ZNF253O75346 499 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 IGHV4-59P01825 116 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 IER3P46695 156 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 BLCAPP62952 87 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 PDZD11Q5EBL8 140 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 PRNTQ86SH4 94 aa8.89□□□□□ -0.99
RAB5C-208ENST00000551338 CIARTQ8N365 385 aaPredicted RBP8.89□□□□□ -0.99
RAB5C-208ENST00000551338 NOL4LQ96MY1 436 aaPredicted RBP8.89□□□□□ -0.99
RAB5C-208ENST00000551338 USP9XQ93008 2570 aaPredicted RBP8.89□□□□□ -0.99
RAB5C-208ENST00000551338 XKRY2A2RUG3 117 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 SNURFLB1AK76 121 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 PRB4P10163 310 aaPredicted RBP8.88□□□□□ -0.99
RAB5C-208ENST00000551338 S100A7P31151 101 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 TPPP2P59282 170 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 PSG9Q00887 426 aa8.88□□□□□ -0.99
RAB5C-208ENST00000551338 CFHR3Q02985 330 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms