RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 USP9YO00507 2555 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-206ENST00000550891 FMC1Q96HJ9 113 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 CHRDL1Q9BU40 450 aa12.13□□□□□ -0.47
SCN8A-206ENST00000550891 SOX21Q9Y651 276 aaPredicted RBP12.13□□□□□ -0.47
SCN8A-206ENST00000550891 TRBV7-1A0A0A6YYK4 115 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 UBE2CO00762 179 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 TCRAP04437 139 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 Q5PR19 223 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 POLQO75417 2590 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 UBR5O95071 2799 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-206ENST00000550891 TRBV19A0A075B6N1 114 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 KRTAP10-9P60411 292 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 EXOC3-AS1Q8N2X6 119 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 TMEM190Q8WZ59 177 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 GPR82Q96P67 336 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 UTP20O75691 2785 aaKnown RBP12.12□□□□□ -0.47
SCN8A-206ENST00000550891 CRYBG3Q68DQ2 2970 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 AVPP01185 164 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 TRGV3P03979 118 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 TYMSP04818 313 aa12.12□□□□□ -0.47
SCN8A-206ENST00000550891 MAP1AP78559 2803 aaPredicted RBP12.12□□□□□ -0.47
SCN8A-206ENST00000550891 TRAV9-1A0A075B6T8 112 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
SCN8A-206ENST00000550891 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 CSPG4Q6UVK1 2322 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 CENPEQ02224 2701 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 IGHV3OR16-8A0A075B7F1 116 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 A6NDX4 124 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 V9GYV3 84 aa12.11□□□□□ -0.47
SCN8A-206ENST00000550891 GATCO43716 136 aaKnown RBP12.1□□□□□ -0.47
SCN8A-206ENST00000550891 AMY1AP04745 511 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 CSN1S1P47710 185 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 RELQ04864 619 aaPredicted RBP12.1□□□□□ -0.47
SCN8A-206ENST00000550891 GOLT1AQ6ZVE7 132 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 FAM223BA6NKX1 122 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 ADMP35318 185 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 TPPP2P59282 170 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 FAM223AQ8IWN6 122 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 DAZAP1Q96EP5 407 aaKnown RBP12.1□□□□□ -0.47
SCN8A-206ENST00000550891 IGLV2-8P01709 118 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 IGLC2P0DOY2 106 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 S100A2P29034 98 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 RAB9AP51151 201 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 SMIM12Q96EX1 92 aa12.1□□□□□ -0.47
SCN8A-206ENST00000550891 S100A8P05109 93 aa12.09□□□□□ -0.47
SCN8A-206ENST00000550891 TCL1AP56279 114 aa12.09□□□□□ -0.47
SCN8A-206ENST00000550891 PDE6HQ13956 83 aa12.09□□□□□ -0.47
SCN8A-206ENST00000550891 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
SCN8A-206ENST00000550891 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
SCN8A-206ENST00000550891 PSG9Q00887 426 aa12.08□□□□□ -0.47
SCN8A-206ENST00000550891 C17orf77Q96MU5 243 aa12.08□□□□□ -0.47
SCN8A-206ENST00000550891 IGHG2P01859 326 aa12.08□□□□□ -0.48
SCN8A-206ENST00000550891 BCL6BQ8N143 479 aaPredicted RBP12.08□□□□□ -0.48
SCN8A-206ENST00000550891 ZNF414Q96IQ9 312 aa12.08□□□□□ -0.48
SCN8A-206ENST00000550891 IGF1P05019 195 aa12.08□□□□□ -0.48
SCN8A-206ENST00000550891 PF4V1P10720 104 aa12.08□□□□□ -0.48
SCN8A-206ENST00000550891 PRNTQ86SH4 94 aa12.08□□□□□ -0.48
SCN8A-206ENST00000550891 CCDC140Q96MF4 163 aa12.08□□□□□ -0.48
SCN8A-206ENST00000550891 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 HOXA5P20719 270 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 RPL15P61313 204 aaKnown RBP12.07□□□□□ -0.48
SCN8A-206ENST00000550891 BLCAPP62952 87 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 KLK9Q2XQG4 91 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 DEFB112Q30KQ8 113 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 ACTL10Q5JWF8 245 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 METTL26Q96S19 204 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 KLK9Q9UKQ9 250 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 ZNF785A8K8V0 405 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 SPINK4O60575 86 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 CRIP2P52943 208 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-206ENST00000550891 Q96MF0 132 aa12.07□□□□□ -0.48
SCN8A-206ENST00000550891 NOL4LQ96MY1 436 aaPredicted RBP12.07□□□□□ -0.48
SCN8A-206ENST00000550891 A0A096LNT2 108 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 CDX1P47902 265 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-206ENST00000550891 RAB4BP61018 213 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 SIGLEC15Q6ZMC9 328 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 FAM231DQ6ZW35 169 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 J3QKU1 62 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 PDZD11Q5EBL8 140 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 TRAV8-1A0A0A6YYK1 113 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 LINC00518Q8N0U6 118 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 NUDT10Q8NFP7 164 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 NUDT11Q96G61 164 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
SCN8A-206ENST00000550891 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 P01737 135 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 IGHV4-31P0DP07 118 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 IER3P46695 156 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 ATP6V0BQ99437 205 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 H3BUA1 57 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 CA1P00915 261 aaPredicted RBP12.05□□□□□ -0.48
SCN8A-206ENST00000550891 LTAP01374 205 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 IGHV4-59P01825 116 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 ARL3P36405 182 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 SLC35B1P78383 322 aa12.05□□□□□ -0.48
SCN8A-206ENST00000550891 Q86TA4 180 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms