RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 NPFFO15130 113 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 TOMM40O96008 361 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 PINLYPA6NC86 204 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 NBR2O15453 112 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 SNRPD3P62318 126 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 METRNQ9UJH8 293 aa12.94□□□□□ -0.34
RBFOX1-212ENST00000550418 PLNP26678 52 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 IFI27P40305 119 aaPredicted RBP12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 FDCSPQ8NFU4 85 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 MOB4Q9Y3A3 225 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 SLAQ13239 276 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 ZNF329Q86UD4 541 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 TMEM133Q9H2Q1 129 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 TRGV3P03979 118 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 C9orf106Q8NAJ2 232 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 GFRA4Q9GZZ7 299 aa12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 MBNL3Q9NUK0 354 aaKnown RBP12.93□□□□□ -0.34
RBFOX1-212ENST00000550418 CDKN1BP46527 198 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 CLEC19AQ6UXS0 136 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 CD177Q8N6Q3 437 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 PYGO2Q9BRQ0 406 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 PGPEP1Q9NXJ5 209 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 IGKV1-39P01597 117 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 IGKV1D-39P04432 117 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 MLANAQ16655 118 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 AMN1Q8IY45 258 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 PAX1P15863 534 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 TMEM167AQ8TBQ9 72 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 CADP27708 2225 aa12.92□□□□□ -0.34
RBFOX1-212ENST00000550418 HAPLN4Q86UW8 402 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 IGKV2-40A0A087WW87 121 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 LINC01549A6NIU2 74 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 IGKV2D-40P01614 121 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 TMEM249Q2WGJ8 235 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 RNF182Q8N6D2 247 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 TSSC4Q9Y5U2 329 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 IGHV3OR16-12A0A075B7B8 117 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 RNASE2P10153 161 aaKnown RBP12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 APOBEC3AP31941 199 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 C17orf82Q86X59 251 aaPredicted RBP12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 TMEM158Q8WZ71 300 aa12.91□□□□□ -0.34
RBFOX1-212ENST00000550418 TRAV21A0A0B4J279 112 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 RAX2Q96IS3 184 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 ZNF407Q9C0G0 2248 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 ETDBQ3ZM63 59 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 RPL15P61313 204 aaKnown RBP12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 K7EP34 96 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 COX8AP10176 69 aa12.9□□□□□ -0.34
RBFOX1-212ENST00000550418 IGKV3OR2-268A0A0C4DH90 116 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 VDAC2P45880 294 aaPredicted RBP12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 ZNF524Q96C55 264 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 PLA2G2EQ9NZK7 142 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 BVES-AS1Q5T3Y7 98 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 SPACA3Q8IXA5 215 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 IGHV1-18A0A0C4DH31 117 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 WISP1O95388 367 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 IL18BPO95998 194 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 CT83Q5H943 113 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 Q86TA4 180 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 PRB3Q04118 309 aaPredicted RBP12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 TMEM155Q4W5P6 130 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 RCHY1Q96PM5 261 aa12.89□□□□□ -0.35
RBFOX1-212ENST00000550418 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 SH2D1AO60880 128 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 Q6ZVH6 145 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 CCL25O15444 150 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 SSBP2P81877 361 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 RRN3P1Q2M238 152 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 FAM231DQ6ZW35 169 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 YAE1D1Q9NRH1 226 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 ZNF492Q9P255 531 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 TRBV7-9A0A0J9YWB2 115 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 MLNRO43193 412 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 LY6EQ16553 131 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 BSPH1Q075Z2 132 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 C11orf52Q96A22 123 aa12.88□□□□□ -0.35
RBFOX1-212ENST00000550418 SMIM27A0A1W2PRY6 76 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 GGTLC3B5MD39 225 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 TMEM238C9JI98 176 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 ATXN8Q156A1 80 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 ZCCHC24Q8N2G6 241 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 PDLIM4P50479 330 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 CEACAM8P31997 349 aaPredicted RBP12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 SRSF6Q13247 344 aaKnown RBP12.87□□□□□ -0.35
RBFOX1-212ENST00000550418 CD7P09564 240 aa12.86□□□□□ -0.35
RBFOX1-212ENST00000550418 CNTFRP26992 372 aa12.86□□□□□ -0.35
RBFOX1-212ENST00000550418 IGLC7A0M8Q6 106 aa12.86□□□□□ -0.35
RBFOX1-212ENST00000550418 CD24P25063 80 aa12.86□□□□□ -0.35
RBFOX1-212ENST00000550418 TNFRSF14Q92956 283 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms