RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MYLKQ15746 1914 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 TRBV7-9A0A0J9YWB2 115 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 DMRTA1Q5VZB9 504 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 TRGV11A0A075B6L2 103 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 TRAV1-1A0A0B4J248 108 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 CD28P10747 220 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 MALP21145 153 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 ACTL10Q5JWF8 245 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 F2Z2F3 143 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 LCNL1Q6ZST4 164 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 COLCA2A8K830 154 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 PPBPP02775 128 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 ERVK11-1P61568 191 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 CHCHD5Q9BSY4 110 aa10.4□□□□□ -0.74
CHD4-211ENST00000544484 A0A1B0GWB2 263 aa10.4□□□□□ -0.75
CHD4-211ENST00000544484 PCNX2A6NKB5 2137 aa10.4□□□□□ -0.75
CHD4-211ENST00000544484 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 D6R8Y8 96 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 RPL35AP18077 110 aaKnown RBP10.39□□□□□ -0.75
CHD4-211ENST00000544484 SPSB3Q6PJ21 355 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 DMRTC2Q8IXT2 367 aaPredicted RBP10.39□□□□□ -0.75
CHD4-211ENST00000544484 NHP2Q9NX24 153 aaKnown RBP10.39□□□□□ -0.75
CHD4-211ENST00000544484 TMEM249Q2WGJ8 235 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 Q6ZS49 121 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 KLHL30-AS1Q8NEE0 82 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 LINC00479Q96M42 142 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 HIST1H2BLQ99880 126 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 TMEM8BA6NDV4 472 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 DPM2O94777 84 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 PRTN3P24158 256 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 LCN12Q6JVE5 192 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 FAM169BQ8N8A8 192 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 TNFSF13O75888 250 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 IGHV3-53P01767 116 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 IFI27L1Q96BM0 104 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 LAMTOR2Q9Y2Q5 125 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 A0A1W2PPI3 338 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 ZNF138P52744 262 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 ZNF415Q09FC8 603 aa10.39□□□□□ -0.75
CHD4-211ENST00000544484 CD300EQ496F6 205 aaPredicted RBP10.39□□□□□ -0.75
CHD4-211ENST00000544484 TRBV24-1A0A075B6N3 115 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 H3BUT2 72 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 ETV2O00321 342 aaPredicted RBP10.38□□□□□ -0.75
CHD4-211ENST00000544484 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 SPCS1Q9Y6A9 102 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 MUC6Q6W4X9 2439 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 OVOL3O00110 214 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 SP5Q6BEB4 398 aaPredicted RBP10.38□□□□□ -0.75
CHD4-211ENST00000544484 WDR86Q86TI4 376 aa10.38□□□□□ -0.75
CHD4-211ENST00000544484 CHTOPQ9Y3Y2 248 aaKnown RBP10.38□□□□□ -0.75
CHD4-211ENST00000544484 SH2D1AO60880 128 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 RHPN1-AS1Q9BWJ2 59 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 DOCK11Q5JSL3 2073 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 TRAV9-2A0A087WT02 112 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 TRAV2A0A0B4J234 112 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 PLA2G2CQ5R387 149 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 REG4Q9BYZ8 158 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 NLRC5Q86WI3 1866 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 ZNF876PQ49A33 203 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 ATP5L2Q7Z4Y8 100 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 TMEM242Q9NWH2 141 aa10.37□□□□□ -0.75
CHD4-211ENST00000544484 TRGV1A0A0A0MS02 117 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 SYNJ2BPP57105 145 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 C9orf139Q6ZV77 190 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 NUP35Q8NFH5 326 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 TMEM256Q8N2U0 113 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 LINC01356Q8N9X3 169 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 C1orf147Q96MC9 270 aaPredicted RBP10.36□□□□□ -0.75
CHD4-211ENST00000544484 AMBPP02760 352 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 ERCC8Q13216 396 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 TTC32Q5I0X7 151 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 HIST3H2BBQ8N257 126 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 MALRD1Q5VYJ5 2156 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 IGKCP01834 107 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 PSG3Q16557 428 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 LINC00469Q8N7U9 141 aa10.36□□□□□ -0.75
CHD4-211ENST00000544484 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 DTX1Q86Y01 620 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
CHD4-211ENST00000544484 C11orf68Q9H3H3 251 aaKnown RBP10.35□□□□□ -0.75
CHD4-211ENST00000544484 TSC2P49815 1807 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 ADARB2-AS1A8MUL3 147 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
CHD4-211ENST00000544484 ANAPC1Q9H1A4 1944 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 UBE2CO00762 179 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 ATP6V0E1O15342 81 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 CHCHD1Q96BP2 118 aaKnown RBP10.35□□□□□ -0.75
CHD4-211ENST00000544484 PTPRQQ9UMZ3 2332 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 TOMM40O96008 361 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 G3V318 75 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 MSMBP08118 114 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 SLC25A16P16260 332 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
CHD4-211ENST00000544484 LIME1Q9H400 295 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms