RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 OR4K15Q8NH41 348 aa2.5□□□□□ -2.01
MDM2-230ENST00000543323 Q96M85 177 aa2.5□□□□□ -2.01
MDM2-230ENST00000543323 TCEAL2Q9H3H9 227 aaPredicted RBP2.5□□□□□ -2.01
MDM2-230ENST00000543323 TRAPPC2LQ9UL33 140 aa2.5□□□□□ -2.01
MDM2-230ENST00000543323 LY96Q9Y6Y9 160 aa2.5□□□□□ -2.01
MDM2-230ENST00000543323 N4BP2Q86UW6 1770 aaPredicted RBP2.5□□□□□ -2.01
MDM2-230ENST00000543323 TRAPPC8Q9Y2L5 1435 aa2.5□□□□□ -2.01
MDM2-230ENST00000543323 VWDEQ8N2E2 1590 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 C2orf70A6NJV1 201 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 RER1O15258 196 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 OR1I1O60431 355 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 OR2T35Q8NGX2 323 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 RETNLBQ9BQ08 111 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 ARAP1Q96P48 1450 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 PIK3C2AO00443 1686 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 NUP210Q8TEM1 1887 aaPredicted RBP2.49□□□□□ -2.01
MDM2-230ENST00000543323 GBF1Q92538 1859 aa2.49□□□□□ -2.01
MDM2-230ENST00000543323 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
MDM2-230ENST00000543323 TRAV14DV4A0A0A6YYC5 116 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 TRAV12-1A0A0B4J245 112 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 J3KT08 172 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 KPNA4O00629 521 aaPredicted RBP2.48□□□□□ -2.01
MDM2-230ENST00000543323 OR10J4P0C629 311 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 FABP2P12104 132 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 SDC2P34741 201 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 ROMO1P60602 79 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 KLRD1Q13241 179 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 PDE6HQ13956 83 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 DEFB113Q30KQ7 82 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 RPS19BP1Q86WX3 136 aaKnown RBP2.48□□□□□ -2.01
MDM2-230ENST00000543323 SFT2D1Q8WV19 159 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 OR5AC2Q9NZP5 309 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 JPT1Q9UK76 154 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 TRPM1Q7Z4N2 1603 aa2.48□□□□□ -2.01
MDM2-230ENST00000543323 MYH10P35580 1976 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 ANAPC1Q9H1A4 1944 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 A0A087WX48 190 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 IGHV1-58A0A0C4DH39 117 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 DEGS1O15121 323 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 DHFRP00374 187 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 NDUFA6P56556 154 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 ARPC4P59998 168 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 PCOTHQ58A44 107 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 CHCHD1Q96BP2 118 aaKnown RBP2.47□□□□□ -2.01
MDM2-230ENST00000543323 SPANXCQ9NY87 97 aa2.47□□□□□ -2.01
MDM2-230ENST00000543323 MICAL3Q7RTP6 2002 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 C17orf112F2Z3M2 114 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 BRS3P32247 399 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 TMEM229BQ8NBD8 167 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 LXNQ9BS40 222 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 COL4A5P29400 1685 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 RTL9Q8NET4 1388 aa2.46□□□□□ -2.02
MDM2-230ENST00000543323 MYO5AQ9Y4I1 1855 aaKnown RBP2.45□□□□□ -2.02
MDM2-230ENST00000543323 TRBV6-5A0A0K0K1A5 114 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 A0A1B0GX51 115 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 ARPC5O15511 151 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 RAB5CP51148 216 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 OR8B8Q15620 311 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 POP5Q969H6 163 aaKnown RBP2.45□□□□□ -2.02
MDM2-230ENST00000543323 ANKRD31Q8N7Z5 1873 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 BAHCC1Q9P281 2608 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 RTTNQ86VV8 2226 aa2.45□□□□□ -2.02
MDM2-230ENST00000543323 RGS12O14924 1447 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 ARHGEF11O15085 1522 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 NISCHQ9Y2I1 1504 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 TRGV2A0A075B6R0 118 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 TRAV36DV7A0A075B6V5 113 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 B4DSR2 109 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 IGLV1-51P01701 117 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 GTF2A1P52655 376 aaPredicted RBP2.44□□□□□ -2.02
MDM2-230ENST00000543323 PSG9Q00887 426 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
MDM2-230ENST00000543323 LINC00305Q7Z4B0 112 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 TMEM254Q8TBM7 123 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 ZNF625Q96I27 306 aaPredicted RBP2.44□□□□□ -2.02
MDM2-230ENST00000543323 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 RASL12Q9NYN1 266 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 COL5A3P25940 1745 aaPredicted RBP2.44□□□□□ -2.02
MDM2-230ENST00000543323 ARHGEF10O15013 1369 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 RP1P56715 2156 aa2.44□□□□□ -2.02
MDM2-230ENST00000543323 BRWD1Q9NSI6 2320 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 TRBV7-6A0A0J9YX20 115 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 KRTAP12-1P59990 96 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 C10orf55Q5SWW7 151 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 FAM216BQ8N7L0 139 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 Q8N814 137 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 MAFIPQ8WZ33 124 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 MCEEQ96PE7 176 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 TAF9BQ9HBM6 251 aa2.43□□□□□ -2.02
MDM2-230ENST00000543323 SOX21Q9Y651 276 aaPredicted RBP2.43□□□□□ -2.02
MDM2-230ENST00000543323 XIRP1Q702N8 1843 aaKnown RBP2.42□□□□□ -2.02
MDM2-230ENST00000543323 PCNX2A6NKB5 2137 aa2.42□□□□□ -2.02
MDM2-230ENST00000543323 FRMPD1Q5SYB0 1578 aa2.42□□□□□ -2.02
MDM2-230ENST00000543323 IGKV2D-26A0A0A0MRZ7 120 aa2.42□□□□□ -2.02
MDM2-230ENST00000543323 LOC107984640A0A0U1RRK4 108 aa2.42□□□□□ -2.02
MDM2-230ENST00000543323 M0R233 179 aa2.42□□□□□ -2.02
MDM2-230ENST00000543323 MT-ND6P03923 174 aa2.42□□□□□ -2.02
MDM2-230ENST00000543323 DSCR4P56555 118 aaPredicted RBP2.42□□□□□ -2.02
MDM2-230ENST00000543323 VMA21Q3ZAQ7 101 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms