RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 GTSF1Q8WW33 167 aa11.94□□□□□ -0.5
VARS2-211ENST00000541562 PSMB11A5LHX3 300 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 PAX1P15863 534 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 POU2AF1Q16633 256 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 UBTD1Q9HAC8 227 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 IGKV2-40A0A087WW87 121 aaPredicted RBP11.93□□□□□ -0.5
VARS2-211ENST00000541562 ZNF324O75467 553 aaPredicted RBP11.93□□□□□ -0.5
VARS2-211ENST00000541562 IGKV2D-40P01614 121 aaPredicted RBP11.93□□□□□ -0.5
VARS2-211ENST00000541562 NPSP0C0P6 89 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 SPATA12Q7Z6I5 190 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 GNG7O60262 68 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 TMEM183BQ1AE95 376 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 RNF2Q99496 336 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 OSTCQ9NRP0 149 aa11.93□□□□□ -0.5
VARS2-211ENST00000541562 IZUMO1RA6ND01 250 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 SLC25A39Q9BZJ4 359 aaPredicted RBP11.92□□□□□ -0.5
VARS2-211ENST00000541562 RBPJQ06330 500 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 TMEM219Q86XT9 240 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 CACNG8Q8WXS5 425 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 C21orf62-AS1Q17RA5 79 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 EBLN2Q6P2I7 272 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 NIT1Q86X76 327 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 TMEM116Q8NCL8 245 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 KCNS1Q96KK3 526 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 GNB1LQ9BYB4 327 aa11.92□□□□□ -0.5
VARS2-211ENST00000541562 COMPP49747 757 aaPredicted RBP11.91□□□□□ -0.5
VARS2-211ENST00000541562 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
VARS2-211ENST00000541562 OR8B3Q8NGG8 313 aa11.91□□□□□ -0.5
VARS2-211ENST00000541562 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
VARS2-211ENST00000541562 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
VARS2-211ENST00000541562 ARMS2P0C7Q2 107 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 MC5RP33032 325 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 DLX6P56179 175 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
VARS2-211ENST00000541562 TCRAP04437 139 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 HTR1DP28221 377 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.5
VARS2-211ENST00000541562 NDPQ00604 133 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 FAM120AOSQ5T036 256 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 DEFB1P60022 68 aa11.9□□□□□ -0.5
VARS2-211ENST00000541562 LINC01548A6NM66 108 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 IGKV1-17P01599 117 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 FAM106CPP0CH98 169 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 HNRNPA3P51991 378 aaKnown RBP11.89□□□□□ -0.51
VARS2-211ENST00000541562 FAM106AQ4KMX7 169 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 GPR82Q96P67 336 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 LOC102724200A0A096LPH7 203 aaPredicted RBP11.89□□□□□ -0.51
VARS2-211ENST00000541562 SMIM27A0A1W2PRY6 76 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 ITGB1BP1O14713 200 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 RAB4AP20338 218 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 A0A1W2PPR1 153 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 NCR2O95944 276 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 HLA-DQA1P01909 254 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 HIST1H1EP10412 219 aaKnown RBP11.89□□□□□ -0.51
VARS2-211ENST00000541562 PAFAH1B2P68402 229 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 WDR73Q6P4I2 378 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 TEX45Q8NA69 505 aa11.89□□□□□ -0.51
VARS2-211ENST00000541562 NPIPB5A8MRT5 1133 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 B9A039 149 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 LCNL1Q6ZST4 164 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 RNF182Q8N6D2 247 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 MRPL32Q9BYC8 188 aaKnown RBP11.88□□□□□ -0.51
VARS2-211ENST00000541562 F11RQ9Y624 299 aaKnown RBP11.88□□□□□ -0.51
VARS2-211ENST00000541562 NAV2Q8IVL1 2488 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 TMEM213A2RRL7 107 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 LGALS7P47929 136 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 SELENOTP62341 195 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 WFDC12Q8WWY7 111 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 G3V318 75 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 TCF21O43680 179 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 STPG4Q8N801 248 aa11.88□□□□□ -0.51
VARS2-211ENST00000541562 RPP21Q9H633 154 aaKnown RBP11.88□□□□□ -0.51
VARS2-211ENST00000541562 IGLV1-47P01700 117 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 UQCRFS1P47985 274 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 MBD6Q96DN6 1003 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 GRAMD2BQ96HH9 432 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 NAA38Q9BRA0 125 aaKnown RBP11.87□□□□□ -0.51
VARS2-211ENST00000541562 GPR183P32249 361 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 ERCC8Q13216 396 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 OR8A1Q8NGG7 326 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 ZNF462Q96JM2 2506 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 ZFP36P26651 326 aaKnown RBP11.87□□□□□ -0.51
VARS2-211ENST00000541562 Q6ZQT7 251 aa11.87□□□□□ -0.51
VARS2-211ENST00000541562 NACAE9PAV3 2078 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 LOC105371242A0A075B767 164 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 FSTL3O95633 263 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 GP9P14770 177 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 TMEM249Q2WGJ8 235 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 BRD3OSQ6XYD6 125 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 MIEN1Q9BRT3 115 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 FBN2P35556 2912 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 CA7P43166 264 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
VARS2-211ENST00000541562 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms