RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 TRBV6-1A0A0K0K1D8 114 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 ORM2P19652 201 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 C9orf139Q6ZV77 190 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 ATP5L2Q7Z4Y8 100 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 TSKUQ8WUA8 353 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 FMC1Q96HJ9 113 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 ATG101Q9BSB4 218 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 C2orf88Q9BSF0 95 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 PRSS22Q9GZN4 317 aa11.51□□□□□ -0.57
SPOCK3-226ENST00000541354 BMPR1BO00238 502 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 HIST1H1EP10412 219 aaKnown RBP11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 TEX43Q6ZNM6 134 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 BAGE3Q86Y29 109 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 FANCD2OSQ96PS1 177 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 MRPL27Q9P0M9 148 aaKnown RBP11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 UBR5O95071 2799 aaPredicted RBP11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 PGPA6NDG6 321 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 H3BUA1 57 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 GPX1P07203 203 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 FAM120AOSQ5T036 256 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 HIF1ANQ9NWT6 349 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 HIGD1AQ9Y241 93 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 NAV3Q8IVL0 2385 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 TRAV40A0A0B4J280 105 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 SCGB1D1O95968 90 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 LTAP01374 205 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 USF2Q15853 346 aaPredicted RBP11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 LINC00469Q8N7U9 141 aa11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 ZNF331Q9NQX6 463 aaPredicted RBP11.5□□□□□ -0.57
SPOCK3-226ENST00000541354 A6NDX4 124 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 OR2J3O76001 311 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 SLC25A5P05141 298 aaKnown RBP11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 SERTAD4Q9NUC0 356 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 FSHBP01225 129 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 PSG1P11464 419 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 UBE2G1P62253 170 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 C19orf54Q5BKX5 351 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 PIFOQ8TCI5 191 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 OTORQ9NRC9 128 aa11.49□□□□□ -0.57
SPOCK3-226ENST00000541354 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 APCSP02743 223 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 NDPQ00604 133 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 KLF5Q13887 457 aaPredicted RBP11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 C19orf35Q6ZS72 473 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 C20orf144Q9BQM9 153 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 A0A1B0GXF2 115 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 A1L4Q6 167 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 F2Z2F3 143 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 IGKV1-17P01599 117 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 TCRAP04437 139 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 TCL1AP56279 114 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 GNG5P63218 68 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 ZNF600Q6ZNG1 722 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 KCNS1Q96KK3 526 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 GFRA4Q9GZZ7 299 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 SOX21Q9Y651 276 aaPredicted RBP11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
SPOCK3-226ENST00000541354 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 FAM231BA6NCW3 169 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 IGF1P05019 195 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 CD24P25063 80 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 NHLRC2Q8NBF2 726 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 HSPB9Q9BQS6 159 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 SLC25A39Q9BZJ4 359 aaPredicted RBP11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 Q9H3A6 140 aa11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 MRPL54Q6P161 138 aaKnown RBP11.47□□□□□ -0.57
SPOCK3-226ENST00000541354 A0A1W2PS18 150 aa11.46□□□□□ -0.57
SPOCK3-226ENST00000541354 NPIPB6E9PJ23 425 aa11.46□□□□□ -0.57
SPOCK3-226ENST00000541354 C16orf54Q6UWD8 224 aa11.46□□□□□ -0.57
SPOCK3-226ENST00000541354 C21orf62Q9NYP8 219 aa11.46□□□□□ -0.57
SPOCK3-226ENST00000541354 FAM223BA6NKX1 122 aa11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 CA1P00915 261 aaPredicted RBP11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 KLF17Q5JT82 389 aaPredicted RBP11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 SIGLECL1Q8N7X8 197 aa11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 BLNKQ8WV28 456 aa11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 PSMG3-AS1Q96PY0 264 aa11.46□□□□□ -0.58
SPOCK3-226ENST00000541354 SPINK4O60575 86 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 SRIP30626 198 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 GDF5OSQ5U4N7 250 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 NEU1Q99519 415 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 SHANK2-AS3Q9BTD1 123 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 PLXNB1O43157 2135 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 ZNF253O75346 499 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 IGHV4-38-2P0DP08 117 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 SLC35B1P78383 322 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 SLAQ13239 276 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 ARL6IP6Q8N6S5 226 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 Q8N976 141 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 SAMD10Q9BYL1 202 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 RPP21Q9H633 154 aaKnown RBP11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 ZNF586Q9NXT0 402 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 TRBV7-1A0A0A6YYK4 115 aa11.45□□□□□ -0.58
SPOCK3-226ENST00000541354 H3BRN7 92 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms