RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 APOHP02749 345 aaPredicted RBP9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 IGLC2P0DOY2 106 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 PF4V1P10720 104 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 FAM223AQ8IWN6 122 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 EXOC3-AS1Q8N2X6 119 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 OCC1Q8TAD7 63 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 Q9H3A6 140 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 URGCP-MRPS24S4R325 110 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 CUBNO60494 3623 aa9.47□□□□□ -0.89
AP003559.1-201ENST00000540906 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 PGPA6NDG6 321 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 IGLV2-8P01709 118 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 CXCL1P09341 107 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 STXBP6Q8NFX7 210 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 SGK494Q96LW2 274 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 IGF2BP2-AS1Q96M15 143 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 SMR3AQ99954 134 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 SMAD5-AS1Q9Y6J3 95 aa9.46□□□□□ -0.9
AP003559.1-201ENST00000540906 IGHV3OR16-13A0A075B7E8 117 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 IGHV3-74A0A0B4J1X5 117 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 IGHV3-66A0A0C4DH42 116 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 PEX7O00628 323 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 BRI3O95415 125 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 C15orf54Q8N8G6 183 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 RPH3ALQ9UNE2 315 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 TRBV19A0A075B6N1 114 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 B4DEV8 164 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 CD5LO43866 347 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 OR5I1Q13606 314 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 ELOBQ15370 118 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 UNQ9165/PRO28630Q6UXU0 137 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 NHLRC2Q8NBF2 726 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 OR5B12Q96R08 314 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 YAE1D1Q9NRH1 226 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 RABAC1Q9UI14 185 aa9.45□□□□□ -0.9
AP003559.1-201ENST00000540906 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 HELTA6NFD8 242 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 H3BUA1 57 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 SLC25A5P05141 298 aaKnown RBP9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 CRYBA1P05813 215 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 ARL3P36405 182 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 RAB9AP51151 201 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 SIGLEC15Q6ZMC9 328 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 BPIFA4PQ86YQ2 179 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 ESM1Q9NQ30 184 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 EPDR1Q9UM22 224 aa9.44□□□□□ -0.9
AP003559.1-201ENST00000540906 C9JCJ5 164 aa9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 ISLRO14498 428 aa9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 IGHG4P01861 327 aa9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 ATF4P18848 351 aaPredicted RBP9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 PSMB8P28062 276 aa9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 OR4X2Q8NGF9 303 aa9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 ZNF580Q9UK33 172 aa9.43□□□□□ -0.9
AP003559.1-201ENST00000540906 BMPR1BO00238 502 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 EDN2P20800 178 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 IGFL4Q6B9Z1 124 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 HIST2H2BDQ6DRA6 164 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 OR4F17Q8NGA8 305 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 ASCL2Q99929 193 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 CLDN34H7C241 214 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 M0R3E3 92 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 RPLP1P05386 114 aaKnown RBP9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 PFN1P07737 140 aaKnown RBP9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 HLA-DMBP28068 263 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 GNG4P50150 75 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 TEX38Q6PEX7 206 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 USMG5Q96IX5 58 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 PRSS22Q9GZN4 317 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 OTORQ9NRC9 128 aa9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 GAR1Q9NY12 217 aaKnown RBP9.42□□□□□ -0.9
AP003559.1-201ENST00000540906 TRAV8-1A0A0A6YYK1 113 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 H7BYZ3 331 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 BUB3O43684 328 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 SCGB2A1O75556 95 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 MT-ND4LP03901 98 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 TCRAP04437 139 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 RAB5AP20339 215 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 C5orf17Q8NAS9 161 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 SFRP2Q96HF1 295 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 CTDSP1Q9GZU7 261 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 TMEM242Q9NWH2 141 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 U3KQE9 123 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 MAST4O15021 2626 aa9.41□□□□□ -0.9
AP003559.1-201ENST00000540906 LOC105371267A0A1B0GV96 52 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 CXorf65A6NEN9 183 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 IGLV2-11P01706 119 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 CNN1P51911 297 aaKnown RBP9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 C1QL4Q86Z23 238 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 OR8I2Q8N0Y5 310 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 ZFP82Q8N141 532 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 NPFFR1Q9GZQ6 430 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 SERTAD4Q9NUC0 356 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms