RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 OR2T8A6NH00 312 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 AP4M1O00189 453 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 BRI3O95415 125 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 ADMP35318 185 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 MYCNOSP40205 109 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 RPL35P42766 123 aaKnown RBP9.67□□□□□ -0.86
SMAD3-204ENST00000540846 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
SMAD3-204ENST00000540846 ELOBQ15370 118 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 LEMD1Q68G75 181 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF600Q6ZNG1 722 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 S100A7AQ86SG5 101 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF329Q86UD4 541 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 FAM24BQ8N5W8 94 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 Q8WTZ3 238 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 ATP6V0BQ99437 205 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 GAR1Q9NY12 217 aaKnown RBP9.67□□□□□ -0.86
SMAD3-204ENST00000540846 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
SMAD3-204ENST00000540846 IGHV3-23P01764 117 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 NBEAP1P0C6P0 100 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 RAB5AP20339 215 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 CRYBB3P26998 211 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 USF2Q15853 346 aaPredicted RBP9.66□□□□□ -0.86
SMAD3-204ENST00000540846 TMEM190Q8WZ59 177 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 EEF1AKMT3Q96AZ1 226 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 ANAPC16Q96DE5 110 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 CCDC140Q96MF4 163 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 CHRDL1Q9BU40 450 aa9.66□□□□□ -0.86
SMAD3-204ENST00000540846 TRBV7-1A0A0A6YYK4 115 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 FAM223BA6NKX1 122 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 H3BUA1 57 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 NDUFA7O95182 113 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 CRYBA1P05813 215 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 GPR183P32249 361 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 FAM223AQ8IWN6 122 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 WIPF2Q8TF74 440 aaPredicted RBP9.65□□□□□ -0.86
SMAD3-204ENST00000540846 ZNF414Q96IQ9 312 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 C16orf95Q9H693 158 aa9.65□□□□□ -0.86
SMAD3-204ENST00000540846 LOC105371267A0A1B0GV96 52 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 PGPEP1LA6NFU8 196 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 H7BYZ3 331 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 IGLV1-40P01703 118 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 HIST1H1EP10412 219 aaKnown RBP9.64□□□□□ -0.87
SMAD3-204ENST00000540846 CENPWQ5EE01 88 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 C10orf99Q6UWK7 81 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 BPIFA4PQ86YQ2 179 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 BLNKQ8WV28 456 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 IGF2BP2-AS1Q96M15 143 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 ATRQ13535 2644 aa9.64□□□□□ -0.87
SMAD3-204ENST00000540846 HELTA6NFD8 242 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 ZNF98A6NK75 572 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 PEX7O00628 323 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 MRPS12O15235 138 aaKnown RBP9.63□□□□□ -0.87
SMAD3-204ENST00000540846 IGLC2P0DOY2 106 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 LINC01006Q8NI28 216 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 OCC1Q8TAD7 63 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 MS4A10Q96PG2 267 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 RNF24Q9Y225 148 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 URGCP-MRPS24S4R325 110 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 K7EN84 100 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 PPP1R2P9O14990 202 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 TGOLN2O43493 480 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 IGHG4P01861 327 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 GNG4P50150 75 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 TAS2R60P59551 318 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 RANP62826 216 aaKnown RBP9.63□□□□□ -0.87
SMAD3-204ENST00000540846 FLI1Q01543 452 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-204ENST00000540846 ATP5G2Q06055 141 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 TEX38Q6PEX7 206 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 PRIMA1Q86XR5 153 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 C5orf17Q8NAS9 161 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 SFRP2Q96HF1 295 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 ZFAND3Q9H8U3 227 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 AURKAIP1Q9NWT8 199 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-204ENST00000540846 ZNF586Q9NXT0 402 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 MLXQ9UH92 298 aa9.63□□□□□ -0.87
SMAD3-204ENST00000540846 TRBV19A0A075B6N1 114 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 TRBV24-1A0A075B6N3 115 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 TGIF2-C20orf24A0A0A6YYL0 155 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 BMPR1BO00238 502 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 TRGV3P03979 118 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 CLEC3BP05452 202 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 CXCL1P09341 107 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 PSMB8P28062 276 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 S100A7P31151 101 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 GALR1P47211 349 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 CNN1P51911 297 aaKnown RBP9.62□□□□□ -0.87
SMAD3-204ENST00000540846 OR4F17Q8NGA8 305 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 Q9H3A6 140 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 OTORQ9NRC9 128 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 RABAC1Q9UI14 185 aa9.62□□□□□ -0.87
SMAD3-204ENST00000540846 FBN1P35555 2871 aaKnown RBP9.61□□□□□ -0.87
SMAD3-204ENST00000540846 PGPA6NDG6 321 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 SLC25A5P05141 298 aaKnown RBP9.61□□□□□ -0.87
SMAD3-204ENST00000540846 PFN1P07737 140 aaKnown RBP9.61□□□□□ -0.87
SMAD3-204ENST00000540846 SNRPCP09234 159 aaKnown RBP9.61□□□□□ -0.87
SMAD3-204ENST00000540846 TOMM20LQ6UXN7 152 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 CLEC19AQ6UXS0 136 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 C1QL4Q86Z23 238 aa9.61□□□□□ -0.87
SMAD3-204ENST00000540846 RNF152Q8N8N0 203 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms