RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 HIST1H2BNQ99877 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BMQ99879 126 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 SAP30O75446 220 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 IGHV4-39P01824 125 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 CD33P20138 364 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 GNLYP22749 145 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 RPL15P61313 204 aaKnown RBP5.3□□□□□ -1.56
LSAMP-207ENST00000539563 DPH3P1Q9H4G8 78 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 C2orf16Q68DN1 1984 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 RNF166Q96A37 237 aaPredicted RBP5.3□□□□□ -1.56
LSAMP-207ENST00000539563 CHCHD5Q9BSY4 110 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 NDUFAF3Q9BU61 184 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 H3BUX3 64 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 AMBPP02760 352 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 NHP2Q9NX24 153 aaKnown RBP5.3□□□□□ -1.56
LSAMP-207ENST00000539563 ERG28Q9UKR5 140 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 M0R2P5 195 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 PDE6HQ13956 83 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 PIP4P2Q8N4L2 257 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.3□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV1-5P01602 117 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 CYTL1Q9NRR1 136 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 RFNGQ9Y644 331 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 GGTLC3B5MD39 225 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 SH2D1AO60880 128 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 LINC00158P58513 81 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 ASCL4Q6XD76 172 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 VSIRQ9H7M9 311 aa5.3□□□□□ -1.56
LSAMP-207ENST00000539563 OBSL1O75147 1896 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 GZMBP10144 247 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 NTF4P34130 210 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 SRSF4Q08170 494 aaKnown RBP5.29□□□□□ -1.56
LSAMP-207ENST00000539563 C11orf68Q9H3H3 251 aaKnown RBP5.29□□□□□ -1.56
LSAMP-207ENST00000539563 SRSF6Q13247 344 aaKnown RBP5.29□□□□□ -1.56
LSAMP-207ENST00000539563 S100A7L2Q5SY68 101 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 OVOL2Q9BRP0 275 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 TNFSF13O75888 250 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 SELLP14151 372 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 E7EQL1 145 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM95Q3KNT9 176 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 NUP35Q8NFH5 326 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 RASL10AQ92737 203 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 FNDC4Q9H6D8 234 aaPredicted RBP5.29□□□□□ -1.56
LSAMP-207ENST00000539563 RNF114Q9Y508 228 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 A0A087WX48 190 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 CFPP27918 469 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 GFI1BQ5VTD9 330 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 LINC01551Q86U37 167 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 IGKV1D-17A0A075B6S4 117 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV12-3A0A0B4J271 114 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 D6R8Y8 96 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 H3BUT2 72 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 INSP01308 110 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 TDGF1P3P51864 188 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 ATXN8Q156A1 80 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 ACTL10Q5JWF8 245 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 KLHL30-AS1Q8NEE0 82 aa5.29□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV8-4A0A0B4J246 113 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 SRRM4A7MD48 611 aaKnown RBP5.28□□□□□ -1.56
LSAMP-207ENST00000539563 TCRAP04437 139 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 PRTN3P24158 256 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 TEX43Q6ZNM6 134 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 MSRB2Q9Y3D2 182 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 C15orf62A8K5M9 175 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 K7ENP7 123 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 ERCC8Q13216 396 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 C10orf55Q5SWW7 151 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 LYZL1Q6UWQ5 148 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 GLRX5Q86SX6 157 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 HIST1H2BLQ99880 126 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 A8MWV9 139 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 RNASE2P10153 161 aaKnown RBP5.28□□□□□ -1.56
LSAMP-207ENST00000539563 ZNF876PQ49A33 203 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 UBE2DNLQ8IWF7 75 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 MESP1Q9BRJ9 268 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 MRPL27Q9P0M9 148 aaKnown RBP5.28□□□□□ -1.56
LSAMP-207ENST00000539563 TRIOBPQ9H2D6 2365 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 CEP290O15078 2479 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 TRAV3A0A0B4J244 114 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 LCNL1Q6ZST4 164 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 LINC00527Q9UJ94 153 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 C11orf44Q8N8P7 122 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 SSC4DQ8WTU2 575 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 GFRA4Q9GZZ7 299 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 NDUFB8O95169 186 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 SAMD5Q5TGI4 173 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 SPATA31B1PQ5VZV4 182 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 RPP25LQ8N5L8 163 aaKnown RBP5.28□□□□□ -1.56
LSAMP-207ENST00000539563 DERL1Q9BUN8 251 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 NCOR1P1Q9H4R4 102 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 LINC00473A8K010 186 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 FCN3O75636 299 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 SAA4P35542 130 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 TMEM75Q8N9X5 138 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 AKAP6Q13023 2319 aa5.28□□□□□ -1.56
LSAMP-207ENST00000539563 WFDC12Q8WWY7 111 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 CXCL1P09341 107 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 LMO1P25800 156 aa5.27□□□□□ -1.57
LSAMP-207ENST00000539563 LYPD2Q6UXB3 125 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms