RNA–Protein interactions for RNA: ENST00000537585.1

SRGAP1-203, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 3

Gene SRGAP1, Length 368 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-203ENST00000537585 CD109Q6YHK3 1445 aa1.54□□□□□ -2.16
SRGAP1-203ENST00000537585 A2MP01023 1474 aa1.54□□□□□ -2.16
SRGAP1-203ENST00000537585 RIMBP3CA6NJZ7 1639 aa1.54□□□□□ -2.16
SRGAP1-203ENST00000537585 RIMBP3BA6NNM3 1639 aa1.54□□□□□ -2.16
SRGAP1-203ENST00000537585 RIMBP3Q9UFD9 1639 aa1.54□□□□□ -2.16
SRGAP1-203ENST00000537585 IGHV3-64A0A075B6Q5 118 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 FAM236AA0A1B0GUQ0 79 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 FAM236BA0A1B0GV22 79 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 A0A1W2PNN7 141 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 ATP6V1G2-DDX39BF2Z307 99 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 K7EP13 123 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 DLEU1O43261 78 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 TPST1O60507 370 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 IGLV6-57P01721 117 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 SLC25A5P05141 298 aaKnown RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 METTL15P1P0C7V9 234 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 IGLC6P0CF74 106 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 TPT1P13693 172 aaKnown RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 ZNF25P17030 456 aaPredicted RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 EVI2AP22794 236 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 RPL22P35268 128 aaKnown RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 FXYD2P54710 66 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 PCBD1P61457 104 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 CAMSAP2Q08AD1 1489 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 ZNF345Q14585 488 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 ZNF638Q14966 1978 aaKnown RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 DEFB115Q30KQ5 88 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 ZNF791Q3KP31 576 aaPredicted RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 GLYATL3Q5SZD4 288 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 Q5XG85 94 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 C7orf65Q6ZTY9 151 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 C3orf56Q8N813 242 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 Q8NDZ9 215 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 OR8B3Q8NGG8 313 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 TOPBP1Q92547 1522 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 POP5Q969H6 163 aaKnown RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 TRPM3Q9HCF6 1732 aaPredicted RBP1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 KIF13BQ9NQT8 1826 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 TAS2R4Q9NYW5 299 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 DSPPQ9NZW4 1301 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 ERG28Q9UKR5 140 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 LY96Q9Y6Y9 160 aa1.53□□□□□ -2.16
SRGAP1-203ENST00000537585 DOCK6Q96HP0 2047 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 OTOFQ9HC10 1997 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 TUBGCP6Q96RT7 1819 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 MED1Q15648 1581 aaPredicted RBP1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 CECR2Q9BXF3 1484 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 IGKV2-24A0A0C4DH68 120 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 TRBV27A0A0K0K1C4 114 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 A8MWV9 139 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 E7EQL1 145 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 LYRM1O43325 122 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 SNAPC5O75971 98 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 CRPP02741 224 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 SCTP09683 121 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 ASAH2BP0C7U1 165 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 PRB4P10163 310 aaPredicted RBP1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 FUSP35637 526 aaKnown RBP eCLIP1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 MAXP61244 160 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 SNRPD3P62318 126 aaKnown RBP1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 SS18Q15532 418 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 TAF9Q16594 264 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 MORN2Q502X0 79 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 CLLU1Q5K131 121 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 Q8IYB0 196 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 MMGT1Q8N4V1 131 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 OR5D14Q8NGL3 314 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 CGREF1Q99674 301 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 GGACTQ9BVM4 153 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 CST11Q9H112 138 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 CST9LQ9H4G1 147 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 RNF122Q9H9V4 155 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 COMMD3Q9UBI1 195 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 TPRKBQ9Y3C4 175 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 MYH3P11055 1940 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 ATAD5Q96QE3 1844 aa1.52□□□□□ -2.17
SRGAP1-203ENST00000537585 SYNJ1O43426 1573 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 SPATA31E1Q6ZUB1 1445 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 THADAQ6YHU6 1953 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 IGLV10-54A0A075B6I4 117 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 TRAV27A0A087WT01 109 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 A0A096LPI6 279 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 IGKV2D-26A0A0A0MRZ7 120 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 ODF3BA8MYP8 253 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 B4DSR2 109 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 F8W036 122 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 PROSCO94903 275 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 HBDP02042 147 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 CTSDP07339 412 aaPredicted RBP1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 FABP4P15090 132 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 GUCA1AP43080 201 aaPredicted RBP1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 SSR2P43308 183 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 BLCAPP62952 87 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 CIRBPQ14011 172 aaKnown RBP1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 DIAPH2-AS1Q14236 149 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 ZNF846Q147U1 533 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 WHAMMP3Q1A5X7 153 aa1.51□□□□□ -2.17
SRGAP1-203ENST00000537585 TMEM14EPQ6UXP3 125 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms