RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 ECSCRQ19T08 205 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 CT83Q5H943 113 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 SIGLEC15Q6ZMC9 328 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 K7EQM0 130 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 S100A7P31151 101 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 Q0VG73 95 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 PDE6HQ13956 83 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 KLK9Q2XQG4 91 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 DAZAP1Q96EP5 407 aaKnown RBP12.26□□□□□ -0.45
MKS1-204ENST00000537529 KLK9Q9UKQ9 250 aa12.26□□□□□ -0.45
MKS1-204ENST00000537529 CACNA1AO00555 2505 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 IGHV1-69DA0A0B4J2H0 117 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 VWC2LB2RUY7 222 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 P01737 135 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 IGHV1-69P01742 117 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 BAGE3Q86Y29 109 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 TMEM75Q8N9X5 138 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 NUP35Q8NFH5 326 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 ZNF414Q96IQ9 312 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 NEU1Q99519 415 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 PKD1L2Q7Z442 2459 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 CTSGP08311 255 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 GZMBP10144 247 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 ATP5J2P56134 94 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 C17orf77Q96MU5 243 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 PRDM13Q9H4Q3 707 aa12.25□□□□□ -0.45
MKS1-204ENST00000537529 A8MWL6 223 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 IGLV2-11P01706 119 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 APCSP02743 223 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 ESDP10768 282 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 TPPP2P59282 170 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 ATP5L2Q7Z4Y8 100 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 PRNTQ86SH4 94 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 C5orf56Q8N8D9 126 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 SPOCK3Q9BQ16 436 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 PRSS22Q9GZN4 317 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 RABAC1Q9UI14 185 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
MKS1-204ENST00000537529 TRAV8-1A0A0A6YYK1 113 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 HIGD1CA8MV81 97 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 NUPR1O60356 82 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 SERF1AO75920 110 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 RPL7P18124 248 aaKnown RBP12.23□□□□□ -0.45
MKS1-204ENST00000537529 RHOGP84095 191 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 C15orf32Q32M92 178 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 BCL6BQ8N143 479 aaPredicted RBP12.23□□□□□ -0.45
MKS1-204ENST00000537529 ZNF502Q8TBZ5 544 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 AAMDCQ9H7C9 122 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 MOB4Q9Y3A3 225 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 BMPR1BO00238 502 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 PAFAH1B2P68402 229 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 OR10J3Q5JRS4 329 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 LINC00322Q6ZN03 302 aaPredicted RBP12.23□□□□□ -0.45
MKS1-204ENST00000537529 OR4B1Q8NGF8 309 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 ZFP30Q9Y2G7 519 aa12.23□□□□□ -0.45
MKS1-204ENST00000537529 PIEZO1Q92508 2521 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 PSG9Q00887 426 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 GNB4Q9HAV0 340 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 SOX21Q9Y651 276 aaPredicted RBP12.22□□□□□ -0.45
MKS1-204ENST00000537529 TRAV40A0A0B4J280 105 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 GPR183P32249 361 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 LINC00310P59036 64 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 GFRA4Q9GZZ7 299 aa12.22□□□□□ -0.45
MKS1-204ENST00000537529 SERTM2A0A1B0GWG4 89 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 DIRC3C9JPN6 131 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 COL8A1P27658 744 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 CSN1S1P47710 185 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 PKIAP61925 76 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 PSG3Q16557 428 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 CIARTQ8N365 385 aaPredicted RBP12.21□□□□□ -0.45
MKS1-204ENST00000537529 MS4A10Q96PG2 267 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
MKS1-204ENST00000537529 IGHV4-30-2A0A087WSY4 118 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 NPIPB6E9PJ23 425 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 SRIP30626 198 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 IQCJQ1A5X6 159 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 TCF24Q7RTU0 167 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 EEF1AKMT3Q96AZ1 226 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 A0A1B0GXF2 115 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 FAM231BA6NCW3 169 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 SH2D7A6NKC9 451 aaPredicted RBP12.2□□□□□ -0.46
MKS1-204ENST00000537529 G3V318 75 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 TSTD3H0UI37 97 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 RNF224P0DH78 156 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 CTAG1AP78358 180 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 TMEM219Q86XT9 240 aa12.2□□□□□ -0.46
MKS1-204ENST00000537529 F2Z2F3 143 aa12.19□□□□□ -0.46
MKS1-204ENST00000537529 HBBP68871 147 aa12.19□□□□□ -0.46
MKS1-204ENST00000537529 SLAQ13239 276 aa12.19□□□□□ -0.46
MKS1-204ENST00000537529 BRD3OSQ6XYD6 125 aa12.19□□□□□ -0.46
MKS1-204ENST00000537529 ARL6IP6Q8N6S5 226 aa12.19□□□□□ -0.46
MKS1-204ENST00000537529 MEGF9Q9H1U4 602 aa12.19□□□□□ -0.46
MKS1-204ENST00000537529 LINC01548A6NM66 108 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 M0R3E3 92 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 ZNF253O75346 499 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 RAB9AP51151 201 aa12.18□□□□□ -0.46
MKS1-204ENST00000537529 GDF5OSQ5U4N7 250 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms